1K25
PBP2x from a Highly Penicillin-resistant Streptococcus pneumoniae Clinical Isolate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-4 |
Synchrotron site | ESRF |
Beamline | ID14-4 |
Temperature [K] | 100 |
Detector technology | CCD |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.979 |
Spacegroup name | P 32 |
Unit cell lengths | 146.560, 146.560, 132.610 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 19.900 - 3.200 |
R-factor | 0.235 |
Rwork | 0.235 |
R-free | 0.31200 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.600 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 3.400 |
High resolution limit [Å] | 3.200 | 3.200 |
Rmerge | 0.110 | 0.367 * |
Total number of observations | 167780 * | |
Number of reflections | 46531 | |
Completeness [%] | 96.1 | 97.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 4.8 | 288 | PEG 2000, ammonium sulfate, pH 4.8, VAPOR DIFFUSION, SITTING DROP, temperature 15K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | sodium acetate | 0.2 (M) | |
2 | 1 | reservoir | PEG2000 | 22-24 (%) | |
3 | 1 | reservoir | ammonium sulfate | 200 (mM) |