1JXQ
Structure of cleaved, CARD domain deleted Caspase-9
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL7-1 |
Synchrotron site | SSRL |
Beamline | BL7-1 |
Temperature [K] | 111 |
Detector technology | IMAGE PLATE |
Collection date | 2000-06-26 |
Detector | MARRESEARCH |
Wavelength(s) | 1.08 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 144.300, 81.800, 125.400 |
Unit cell angles | 90.00, 111.70, 90.00 |
Refinement procedure
Resolution | 20.000 * - 2.800 |
R-factor | 0.233 * |
Rwork | 0.233 |
R-free | 0.27600 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Caspase-3 PDB entry 1CP3 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.400 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 2.850 |
High resolution limit [Å] | 2.800 | 2.800 |
Rmerge | 0.103 | 0.283 |
Total number of observations | 112744 * | |
Number of reflections | 33394 | |
<I/σ(I)> | 14.8 | 3.9 |
Completeness [%] | 99.4 | 93.4 * |
Redundancy | 3 | 2.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | unknown * | 8 * | 298 | 0.1M Mes pH 6.5, 12% PEG 20,000, VAPOR DIFFUSION, SITTING DROP, temperature 298K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | 1 | protein | 8-10 (mg/ml) | |
2 | 1 | 1 | Tris | 10 (mM) | |
3 | 1 | 1 | 100 (mM) | ||
4 | 1 | 1 | dithiothreitol | 1 (mM) | pH8.0 |
5 | 1 | 2 | MES | 0.1 (M) | pH6.5 |
6 | 1 | 2 | PEG20000 | 12 (%) |