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1JFI

Crystal Structure of the NC2-TBP-DNA Ternary Complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2000-07-02
DetectorSBC-2
Spacegroup nameC 2 2 21
Unit cell lengths76.684, 119.075, 155.076
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.840 - 2.620
R-factor0.236
Rwork0.233
R-free0.27700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1cdw
RMSD bond length0.006
RMSD bond angle1.300
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareCNS (0.9)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.710
High resolution limit [Å]2.6202.620
Rmerge0.0580.312
Total number of observations562756

*

Number of reflections21406
<I/σ(I)>19.6
Completeness [%]98.491.6
Redundancy6.75.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.520

*

PEG 4000, sodium citrate, potassium chloride, magnesium chloride, DTT, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111PEG 4000
211sodium citrate
311KCl
411MgCl2
511DTT
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein0.5 (mM)
21reservoir100 (mM)
31reservoir100 (mM)
41reservoir20 (mM)
51reservoirdithiothreitol10 (mM)
61reservoirPEG400020 (%(w/v))

229380

PDB entries from 2024-12-25

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