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1JDI

CRYSTAL STRUCTURE OF L-RIBULOSE-5-PHOSPHATE 4-EPIMERASE

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X12C
Synchrotron siteNSLS
BeamlineX12C
Temperature [K]100
Detector technologyCCD
Collection date1999-07-25
DetectorBRANDEIS - B4
Wavelength(s)0.97
Spacegroup nameP 4 21 2
Unit cell lengths105.900, 105.900, 274.800
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution15.000 - 2.400
R-factor0.208
Rwork0.208
R-free0.24100
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1fua
RMSD bond length0.007
RMSD bond angle1.262
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareCNS (0.9)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.490
High resolution limit [Å]2.4002.400
Rmerge0.0560.201
Number of reflections582934187

*

<I/σ(I)>19.44.1
Completeness [%]93.868.8
Redundancy3.64

*

3.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP72954.0 M sodium formate, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 295.0K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10 (mg/ml)
21reservoirsodium formate4.0 (M)
31reservoirn-octyl-beta-D-glucoside0.1 (%)

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PDB entries from 2024-12-25

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