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1J7X

CRYSTAL STRUCTURE OF A FUNCTIONAL UNIT OF INTERPHOTORECEPTOR RETINOID-BINDING PROTEIN (IRBP)

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsCHESS BEAMLINE F2
Synchrotron siteCHESS
BeamlineF2
Temperature [K]100
Detector technologyCCD
Collection date2000-10-10
DetectorADSC QUANTUM 4
Wavelength(s)0.9777,0.9790,0.9793
Spacegroup nameP 21 21 21
Unit cell lengths63.144, 65.756, 68.174
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000

*

- 1.800
R-factor0.206

*

Rwork0.205
R-free0.23000

*

Structure solution methodMAD
RMSD bond length0.005

*

RMSD bond angle1.234

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSOLVE (V1.17)
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]19.2501.846
High resolution limit [Å]1.8001.800
Rmerge0.0650.495
Number of reflections26579
<I/σ(I)>8.4
Completeness [%]99.999.8
Redundancy4.12
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.54

*

PEG 8000, TRIS, magnesium chloride, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
1VAPOR DIFFUSION, HANGING DROP8.54

*

PEG 8000, TRIS, magnesium chloride, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirTris-HCl100 (mM)pH8.5
21reservoir200 (mM)
31reservoirPEG800020 (%)

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PDB entries from 2024-05-15

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