1J4G
crystal structure analysis of the trichosanthin delta C7
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 110 |
Detector technology | IMAGE PLATE |
Collection date | 2000-07-28 |
Detector | MAR scanner 345 mm plate |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 71.560, 74.400, 87.560 |
Unit cell angles | 90.00, 96.96, 90.00 |
Refinement procedure
Resolution | 30.000 - 2.000 |
R-factor | 0.174 * |
Rwork | 0.174 |
R-free | 0.23500 |
RMSD bond length | 0.014 |
RMSD bond angle | 1.620 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 * | 2.130 |
High resolution limit [Å] | 1.800 * | 1.800 * |
Rmerge | 0.071 * | 0.248 * |
Total number of observations | 61794 * | |
Number of reflections | 19310 * | 1950 * |
<I/σ(I)> | 10.4 | |
Completeness [%] | 98.2 * | 95.8 * |
Redundancy | 3.2 | 3.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 6.5 | 291 | PEG8000, calcium acetate, sodium cacodylate, pH 6.5, EVAPORATION, temperature 291K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 20 (mg/ml) | |
2 | 1 | reservoir | PEG8000 | 15 (%) | |
3 | 1 | reservoir | 0.2 (M) | ||
4 | 1 | reservoir | sodium cacodylate | 0.1 (M) |