1J30
The crystal structure of sulerythrin, a rubrerythrin-like protein from a strictly aerobic and thermoacidiphilic archaeon
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-6A |
Synchrotron site | Photon Factory |
Beamline | BL-6A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2000-05-23 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 1.0000 |
Spacegroup name | P 63 |
Unit cell lengths | 72.428, 72.428, 98.208 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 24.290 - 1.700 |
R-factor | 0.192 |
Rwork | 0.192 |
R-free | 0.22300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ryt |
RMSD bond length | 0.005 |
RMSD bond angle | 17.000 * |
Data reduction software | MOSFLM |
Data scaling software | CCP4 ((SCALA)) |
Phasing software | MOLREP |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 24.250 | 1.790 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.054 | 0.346 |
Total number of observations | 171729 * | |
Number of reflections | 32087 | |
<I/σ(I)> | 10.1 | 2.2 |
Completeness [%] | 99.8 | 99.3 |
Redundancy | 5.4 | 5.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 298 | ammonium sulfate, HEPES-NaOH, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 50 (mg/ml) | |
2 | 1 | drop | Tris-HCl | 5 (mM) | pH8.0 |
3 | 1 | reservoir | ammonium sulfate | 2.0 (M) | |
4 | 1 | reservoir | HEPES-NaOH | 10 (mM) | pH7.5 |