1IXX
CRYSTAL STRUCTURE OF COAGULATION FACTORS IX/X-BINDING PROTEIN (IX/X-BP) FROM VENOM OF HABU SNAKE WITH A HETERODIMER OF C-TYPE LECTIN DOMAINS
Experimental procedure
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-6A |
Synchrotron site | Photon Factory |
Beamline | BL-6A |
Temperature [K] | 288 |
Detector technology | IMAGE PLATE |
Collection date | 1996-05-28 |
Detector | RIGAKU |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 172.200, 85.700, 65.200 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 6.000 - 2.500 |
R-factor | 0.178 |
Rwork | 0.178 |
R-free | 0.22100 |
Structure solution method | SIRAS |
RMSD bond length | 0.007 |
RMSD bond angle | 24.500 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | X-PLOR (3.1) |
Refinement software | X-PLOR (3.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.610 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.053 | 0.229 |
Number of reflections | 29883 | |
<I/σ(I)> | 39 | 6 |
Completeness [%] | 87.0 | 75 |
Redundancy | 3.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 7.8 | Mizuno, H., (1991) J. Mol. Biol., 220, 225. * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | Tris-HCl | 20 (mM) | |
2 | 1 | reservoir | 3 (mM) | ||
3 | 1 | reservoir | ammonium sulfate | 60 (%sat) | |
4 | 1 | drop | protein | 10 (mg/ml) | |
5 | 1 | drop | Tris-HCl | 20 (mM) |