1IRU
Crystal Structure of the mammalian 20S proteasome at 2.75 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | CCD |
Detector | MARRESEARCH |
Wavelength(s) | 1.00 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 316.700, 205.900, 116.000 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 65.000 - 2.750 |
R-factor | 0.25 * |
Rwork | 0.250 |
R-free | 0.29400 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.400 * |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | X-PLOR |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 100.000 * | 2.820 |
High resolution limit [Å] | 2.750 | 2.750 |
Rmerge | 0.095 * | 0.406 * |
Total number of observations | 733250 * | |
Number of reflections | 189429 | |
Completeness [%] | 96.3 | 70 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 25 * | Tomisugi, Y., (2000) J. Biochem., 127, 941. * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | magnesium acetate | 0.15 (M) | |
2 | 1 | reservoir | sodium cacodylate | 0.1 (M) | pH6.5 |
3 | 1 | reservoir | MPD | 35 (%) |