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1IR2

Crystal Structure of Activated Ribulose-1,5-bisphosphate Carboxylase/oxygenase (Rubisco) from Green alga, Chlamydomonas reinhardtii Complexed with 2-Carboxyarabinitol-1,5-bisphosphate (2-CABP)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-18B
Synchrotron sitePhoton Factory
BeamlineBL-18B
Temperature [K]100
Detector technologyDIFFRACTOMETER
Collection date2000-06-09
DetectorWEISSENBERG
Wavelength(s)1.0000
Spacegroup nameP 1 21 1
Unit cell lengths129.170, 174.750, 222.270
Unit cell angles90.00, 97.75, 90.00
Refinement procedure
Resolution39.890 - 1.840
R-factor0.152

*

Rwork0.152
R-free0.18100
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)PDB ID: 1BUR
RMSD bond length0.005
RMSD bond angle1.320
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0001.910
High resolution limit [Å]1.8401.840
Rmerge0.0680.229
Total number of observations4698187

*

Number of reflections763078
Completeness [%]91.072.7
Redundancy6.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP820

*

PEG4000, HEPES-KOH, glycerol, NaHCO3, MgCl2, DTT, 2-carboxyarabinitol-1,5-bisphosphate (2-CABP), EDTA, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropHEPES-KOH80 (mM)pH8.0
101reservoirPEG40006-7 (%)
111reservoirglycerol30 (%(v/v))
21dropEDTA1 (mM)
31dropdithiothreitol5 (mM)
41drop20 (mM)
51drop40 (mM)
61dropprotein25 (mg/ml)
71reservoirHEPES-KOH80 (mM)pH8.0
81reservoirEDTA1 (mM)
91reservoir20 (mM)

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PDB entries from 2024-05-15

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