1IKO
CRYSTAL STRUCTURE OF THE MURINE EPHRIN-B2 ECTODOMAIN
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 19-ID |
| Synchrotron site | APS |
| Beamline | 19-ID |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2000-02-02 |
| Detector | SBC-2 |
| Wavelength(s) | 1.033 |
| Spacegroup name | P 65 2 2 |
| Unit cell lengths | 59.283, 59.283, 168.868 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 19.410 - 1.920 |
| R-factor | 0.215 * |
| Rwork | 0.216 |
| R-free | 0.24800 * |
| Structure solution method | SIRAS |
| RMSD bond length | 0.010 * |
| RMSD bond angle | 1.600 * |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | SHARP |
| Refinement software | CNS |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 19.500 * | 1.990 |
| High resolution limit [Å] | 1.920 | 1.920 |
| Rmerge | 0.042 * | 0.219 * |
| Total number of observations | 315392 * | |
| Number of reflections | 14283 * | |
| <I/σ(I)> | 48 | 18 |
| Completeness [%] | 99.5 | 99.8 |
| Redundancy | 22 | 10 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 4 * | magnesium chloride, PEG 4000, trishydroxyethylmethane, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 277.0K |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | drop | protein | 30-98 (mg/ml) | |
| 2 | 1 | reservoir | Tris | 100 (mM) | pH8.5 |
| 3 | 1 | reservoir | 200 (mM) | ||
| 4 | 1 | reservoir | PEG4000 | 20 (%) |






