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1I8I

CRYSTAL STRUCTURE OF DSFV MR1 IN COMPLEX WITH THE PEPTIDE ANTIGEN OF THE MUTANT EPIDERMAL GROWTH FACTOR RECEPTOR, EGFRVIII, AT ROOM TEMPERATURE

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]293
Detector technologyAREA DETECTOR
Collection date2000-04-21
DetectorMARRESEARCH
Wavelength(s)1.5418
Spacegroup nameC 2 2 21
Unit cell lengths111.600, 45.300, 110.400
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution6.000 - 2.400
R-factor0.173
Rwork0.156
R-free0.26200
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.015

*

RMSD bond angle3.300

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareMERLOT
Refinement softwareX-PLOR
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]6.0002.480
High resolution limit [Å]2.4002.400
Rmerge0.0600.115
Total number of observations10214

*

Number of reflections9684

*

<I/σ(I)>16.2
Completeness [%]86.6

*

58.6

*

Redundancy2.62.46
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP718

*

sodium chloride, MPD, PEG 10K, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11droppeptide4 (mg/ml)
21dropADA buffer40 (mM)pH7.0
31drop25 (mM)
41dropMPD1 (%(w/v))
51dropPEG100006 (%(w/v))
61reservoirADA buffer200 (mM)pH7.0
71reservoirMPD2-3 (%)
81reservoirPEG400016 (%)

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PDB entries from 2024-05-15

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