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1I2Y

1.66 A STRUCTURE OF A-DUPLEX WITH BULGED ADENOSINE, SPERMINE FORM

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 5ID-B
Synchrotron siteAPS
Beamline5ID-B
Temperature [K]100
Detector technologyCCD
Collection date1998-01-11
DetectorMARRESEARCH
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths30.530, 45.220, 162.020
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution10.000 - 1.660
R-factor0.217

*

Rwork0.217
R-free0.24500

*

Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.011

*

RMSD bond angle1.540

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareCNS (1.0)
Data quality characteristics
 Overall
Low resolution limit [Å]20.000
High resolution limit [Å]1.650

*

Rmerge0.042

*

Number of reflections26875

*

Completeness [%]97.4

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

6298spermine, MPD. pH 6.0, VAPOR DIFFUSION, SITTING DROP at 298
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111spermine
211MPD
312MPD
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropDNA0.72 (mM)
21reservoirsodium cacodylate20 (mM)
31reservoirspermine25 (mM)
41reservoirMPD40 (%)

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