1HQ2
CRYSTAL STRUCTURE OF A TERNARY COMPLEX OF E.COLI HPPK(R82A) WITH MGAMPCPP AND 6-HYDROXYMETHYL-7,8-DIHYDROPTERIN AT 1.25 ANGSTROM RESOLUTION
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X9B |
Synchrotron site | NSLS |
Beamline | X9B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2000-11-12 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.96394 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 73.372, 37.843, 58.018 |
Unit cell angles | 90.00, 117.18, 90.00 |
Refinement procedure
Resolution | 30.000 - 1.250 |
R-factor | 0.0968 |
Rwork | 0.107 |
R-free | 0.17200 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1EQO |
RMSD bond length | 0.011 |
RMSD bond angle | 0.027 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | SHELXL-97 |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.290 |
High resolution limit [Å] | 1.250 | 1.250 |
Rmerge | 0.092 | 0.571 |
Total number of observations | 126338 * | |
Number of reflections | 39345 | |
<I/σ(I)> | 12.2875 | 1.678 |
Completeness [%] | 99.3 * | 99 |
Redundancy | 3.211 | 3.079 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 * | 18-20 * | PEG4000, MAGNESIUM CHLORIDE, ACETATE, GLYCEROL , pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 292.0K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 9 (mg/ml) | |
2 | 1 | drop | AMPCPP | 25 (mM) | |
3 | 1 | drop | HP | 15 (mM) | |
4 | 1 | drop | 50 (mM) | ||
5 | 1 | drop | Tris-HCl | 10 (mM) | pH8.0 |
6 | 1 | reservoir | PEG4000 | 25 (%(w/v)) | |
7 | 1 | reservoir | ammonium acetate | 170 (mM) | |
8 | 1 | reservoir | glycerol | 10 (%(v/v)) | |
9 | 1 | reservoir | sodium acetate | 100 (mM) | pH4.6 |