1HCX
Choline binding domain of the major autolysin (C-LytA) from Streptococcus pneumoniae
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE X31 |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | X31 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2000-10-30 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 0.9840,1.0695,1.0715 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 58.049, 118.177, 104.859 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.000 * - 2.600 |
R-factor | 0.218 * |
Rwork | 0.239 |
R-free | 0.28200 * |
Structure solution method | MAD |
RMSD bond length | 0.007 * |
RMSD bond angle | 1.200 * |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | SOLVE |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 35.000 | 2.740 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.049 * | 0.266 * |
Total number of observations | 105081 * | |
Number of reflections | 11378 | |
<I/σ(I)> | 18 | 5.4 |
Completeness [%] | 99.7 | 100 |
Redundancy | 4.5 | 4.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, sitting drop * | 6.4 | 295 * | 30% PEG 4000, 0.2 M NA-ACETATE, 0.1 M AMMONIUM-ACETATE, PH 6.4, 0.15 M CHOLINE-CL, 0.4 MM DDAO. |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | PEG4000 | 30 (%(w/v)) | |
2 | 1 | reservoir | ammonium acetate | 0.2 (M) | |
3 | 1 | reservoir | sodium citrate | 0.1 (M) | pH6.4 |
4 | 1 | reservoir | DDOA | 0.4 (mM) |