1H8I
X-ray crystal structure of human alpha-thrombin with a tripeptide phosphonate inhibitor.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Temperature [K] | 100 |
| Collection date | 1998-06-07 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 70.393, 71.301, 72.416 |
| Unit cell angles | 90.00, 100.87, 90.00 |
Refinement procedure
| Resolution | 20.000 - 1.750 |
| R-factor | 0.186 * |
| Rwork | 0.186 |
| R-free | 0.23500 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1hgt |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.200 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | AMoRE |
| Refinement software | REFMAC |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 20.000 | 1.750 |
| High resolution limit [Å] | 1.750 | 1.750 |
| Rmerge | 0.062 | 0.230 * |
| Number of reflections | 35239 | |
| <I/σ(I)> | 16 | 5 |
| Completeness [%] | 98.0 | 96 * |
| Redundancy | 3 | 2 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | Vapor diffusion, hanging drop * | 7.3 * | Skordalakes, E., (1997) J.Am.Chem.Soc., 119, 9935. * |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | reservoir | PEG8000 | 25 (%(w/v)) | |
| 2 | 1 | reservoir | ammonium phosphate | 0.05 (M) | |
| 3 | 1 | reservoir | sodium azide | 0.05 (M) |






