Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1GYH

Structure of D158A Cellvibrio cellulosa alpha-L-arabinanase mutant

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-1
Synchrotron siteESRF
BeamlineID14-1
Temperature [K]100
Detector technologyCCD
DetectorADSC CCD
Spacegroup nameP 1
Unit cell lengths49.556, 79.557, 132.402
Unit cell angles88.83, 89.58, 83.58
Refinement procedure
Resolution20.000 - 1.900

*

R-factor0.147
Rwork0.147
R-free0.20000

*

Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)MAP FROM AN A P6522 CRYSTAL FORM SOLVED BY MAD
RMSD bond length0.016
RMSD bond angle1.500

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC (5.1.13)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0001.940
High resolution limit [Å]1.9001.900
Rmerge0.0660.269
Number of reflections155379
<I/σ(I)>12.373.08
Completeness [%]97.489.8
Redundancy1.9

*

1.8

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1unknown

*

6.518% PEG5000 MME, 4% AMMONIUM SULFATE, 100MM NA-CACODYLATE PH6.5, 20% GLYCEROL, pH 6.50
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
111PEG5000 MME18 (%(w/v))
211ammonium sulfate4 (%(w/v))
311sodium cacodylate100 (mM)pH6.5
411glycerol20 (%(v/v))

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon