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1GUZ

Structural Basis for Thermophilic Protein Stability: Structures of Thermophilic and Mesophilic Malate Dehydrogenases

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE BW7A
Synchrotron siteEMBL/DESY, HAMBURG
BeamlineBW7A
Temperature [K]100
Spacegroup nameP 21 21 21
Unit cell lengths83.890, 117.390, 125.330
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution26.580 - 2.000
R-factor0.242

*

Rwork0.243
R-free0.29200
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.006
RMSD bond angle1.190

*

Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareAMoRE
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.070
High resolution limit [Å]2.0002.000
Rmerge0.1250.297
Total number of observations502001

*

Number of reflections82230
<I/σ(I)>93
Completeness [%]97.785.6
Redundancy3.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

8.50.15 M NAAC 75 MM TRIS HCL, PH 8.5, 22.5 % PEG 4000
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10 (mg/ml)
21dropsodium acetate0.15 (M)
31dropTris-HCl75 (mM)pH8.5
41reservoirPEG400022.5 (%)

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PDB entries from 2024-05-15

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