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1GQM

The structure of S100A12 in a hexameric form and its proposed role in receptor signalling

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-4
Synchrotron siteESRF
BeamlineID14-4
Temperature [K]120
Collection date1999-02-15
Spacegroup nameP 1 21 1
Unit cell lengths53.875, 100.501, 112.687
Unit cell angles90.00, 94.55, 90.00
Refinement procedure
Resolution20.000

*

- 2.700
R-factor0.217

*

Rwork0.217
R-free0.28100
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1e8a
RMSD bond length0.017

*

RMSD bond angle1.861

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC (5.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.800
High resolution limit [Å]2.7002.700
Rmerge0.0530.412

*

Number of reflections324463107

*

<I/σ(I)>16.72.3
Completeness [%]98.395.3
Redundancy2.62.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.520-25% PEG 5K MONOMETHYL ETHER, 0.2M CALCIUM CHLORIDE, 0.1M SODIUM CACODYLATE, HANGING DROP, pH 6.50
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein4-7 (mg/ml)
21reservoirPEG5000 MME10-20 (%)
31reservoir0.2 (M)
41reservoirsodium cacodylate0.1 (M)pH6.5

246031

PDB entries from 2025-12-10

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