1GD6
STRUCTURE OF THE BOMBYX MORI LYSOZYME
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | MACSCIENCE |
Temperature [K] | 283 |
Detector technology | IMAGE PLATE |
Collection date | 1999-08-09 |
Detector | MAC Science DIP-2000 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 77.268, 77.268, 72.925 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 10.000 - 2.500 |
Rwork | 0.181 |
R-free | 0.22300 * |
Structure solution method | MR |
RMSD bond length | 0.009 |
RMSD bond angle | 1.550 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 100.000 | 2.590 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.080 | 0.300 * |
Total number of observations | 97639 * | |
Number of reflections | 7862 | |
<I/σ(I)> | 20.9 | 3.8388 |
Completeness [%] | 98.6 | 96.4 |
Redundancy | 7.12 | 5.08 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.7 | 18 * | PEG 8000, ammonium sulfate, sodium cacodylate, pH 6.7, VAPOR DIFFUSION, HANGING DROP, temperature 291K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 10 (mg/ml) | |
2 | 1 | drop | ammonium sulfate | 0.2 (M) | |
3 | 1 | drop | PEG8000 | 26 (%(w/v)) | |
4 | 1 | reservoir | sodium cacodylate | 0.1 (M) |