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1F8Y

CRYSTAL STRUCTURE ANALYSIS OF NUCLEOSIDE 2-DEOXYRIBOSYLTRANSFERASE COMPLEXED WITH 5-METHYL-2'-DEOXYPSEUDOURIDINE

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]296
Detector technologyAREA DETECTOR
Collection date1992-01-01
DetectorSDMS
Spacegroup nameI 21 3
Unit cell lengths149.600, 149.600, 149.600
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution5.000 - 2.400
R-factor0.16
Rwork0.160
R-free0.21800
RMSD bond length0.008
RMSD bond angle1.560
Data reduction softwareSDMS
Data scaling softwareSDMS
Phasing softwareX-PLOR
Refinement softwareX-PLOR
Data quality characteristics
 Overall
Low resolution limit [Å]100.000
High resolution limit [Å]2.400
Rmerge0.075
Total number of observations101311

*

Number of reflections21897
Completeness [%]93.0
Redundancy4.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.4296Ammonium Sulfate, Citrate Buffer, pH 5.4, VAPOR DIFFUSION, HANGING DROP, temperature 296K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein40 (mg/ml)
21dropammonium sulfate5 (%sat)
31dropcitrate0.05 (M)
41reservoirammonium sulfate5 (%sat)
51reservoircitrate0.05 (M)

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