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1F8X

CRYSTAL STRUCTURE OF NUCLEOSIDE 2-DEOXYRIBOSYLTRANSFERASE

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]296
Detector technologyAREA DETECTOR
Collection date1989-01-01
DetectorSIEMENS-NICOLET X100
Spacegroup nameI 21 3
Unit cell lengths151.000, 151.000, 151.000
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution5.000 - 2.500
Rwork0.166
R-free0.24000
RMSD bond length0.007
RMSD bond angle1.540
Data reduction softwareSDMS
Data scaling softwareSDMS
Phasing softwarePHASES
Refinement softwareX-PLOR
Data quality characteristics
 Overall
Low resolution limit [Å]100.000
High resolution limit [Å]2.500
Rmerge0.115
Number of reflections19875
Completeness [%]95.0
Redundancy11.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.4296ammonium sulfate, citrate buffer, pH 5.4, VAPOR DIFFUSION, HANGING DROP, temperature 296K
1VAPOR DIFFUSION, HANGING DROP5.4296ammonium sulfate, citrate buffer, pH 5.4, VAPOR DIFFUSION, HANGING DROP, temperature 296K
1VAPOR DIFFUSION, HANGING DROP5.4296ammonium sulfate, citrate buffer, pH 5.4, VAPOR DIFFUSION, HANGING DROP, temperature 296K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein40 (mg/ml)
21dropammonium sulfate5 (%sat)
31dropcitrate0.05 (M)
41reservoirammonium sulfate5 (%sat)
51reservoircitrate0.05 (M)

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PDB entries from 2025-06-11

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