1EK9
2.1A X-RAY STRUCTURE OF TOLC: AN INTEGRAL OUTER MEMBRANE PROTEIN AND EFFLUX PUMP COMPONENT FROM ESCHERICHIA COLI
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 1999-11-18 |
Detector | CUSTOM-MADE |
Spacegroup name | H 3 |
Unit cell lengths | 265.049, 265.049, 95.959 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 20.000 - 2.100 |
R-factor | 0.208 |
Rwork | 0.208 |
R-free | 0.25700 |
RMSD bond length | 0.018 |
RMSD bond angle | 1.300 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SHARP |
Refinement software | BUSTER-TNT |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 129.000 | 2.210 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.063 | 0.261 |
Total number of observations | 1388136 * | |
Number of reflections | 146143 * | |
<I/σ(I)> | 6.5 | |
Completeness [%] | 99.6 | 99.6 |
Redundancy | 9.5 | 3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.4 | 25 * | PEG 2000 MME, PEG 400, Sodium Chloride, Magnesium Chloride, dodecyl glucopyrsanoside, hexyl glucopyranoside, heptyl gluocopyranoside, octyl glucopyranoside, 1,2,3-heptanetriol, Tris, pH 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 298K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | detergent mixture | 0.6 (%) | |
10 | 1 | reservoir | Tris-HCl | 20 (mM) | |
2 | 1 | drop | 1,2,3-heptanetriol | 1.5 (%) | |
3 | 1 | drop | mPEG2000 | 7 (%) | |
4 | 1 | drop | PEG400 | 10 (%) | |
5 | 1 | drop | 10 (mM) | ||
6 | 1 | drop | Tris-HCl | 20 (mM) | |
7 | 1 | drop | protein | 10-15 (mg/ml) | |
8 | 1 | reservoir | mPEG2000 | 12.5 (%) | |
9 | 1 | reservoir | 400 (mM) |