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1E7L

Endonuclease VII (EndoVII) N62D mutant from phage T4

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE BW7B
Synchrotron siteEMBL/DESY, HAMBURG
BeamlineBW7B
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date1998-04-15
DetectorMAR scanner 345 mm plate
Spacegroup nameP 1 21 1
Unit cell lengths58.240, 35.830, 91.930
Unit cell angles90.00, 103.93, 90.00
Refinement procedure
Resolution35.000 - 1.320
R-factor0.145
Rwork0.146
R-free0.18600
Structure solution methodMIRAS
RMSD bond length0.010
RMSD bond angle0.019
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSHARP
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]27.0001.370
High resolution limit [Å]1.3201.320
Rmerge0.075

*

0.301

*

Total number of observations243182

*

Number of reflections81068
<I/σ(I)>9.92.3
Completeness [%]96.588.9
Redundancy2.99
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.54

*

HANGING DROP VAPOUR DIFFUSION DROP SIZE: 1 + 1 UL PROTEIN SOLUTION: 12 MG/ML ENDOVII, 175 MM NACL, 20 MM MGCL2, 2 MM ZNCL2, 10 MM 2-MERCAPTO-ETHANOL, 10 % GLYCEROL, 10 MM MOPS PH6 WELL: 16-18% PEG5KMME, 200 MM AMMONIUM SULPHATE, 10 MM 2-MERCAPTO-ETHANOL, 100 MM TRIS PH 4.5, ~1 MM SODIUM AZIDE, 20 MM MAGNESIUM ACETATE
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein12 (mg/ml)
21reservoirPEG5000 MME15.5-16 (%(w/v))
31reservoirsodium acetate100 (mM)
41reservoirammonium sulfate160 (mM)
51reservoirmagnesium acetate20 (mM)
61reservoirbeta-mercaptoethanol10 (mM)

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