Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1DOA

Structure of the rho family gtp-binding protein cdc42 in complex with the multifunctional regulator rhogdi

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCHESS BEAMLINE F2
Synchrotron siteCHESS
BeamlineF2
Temperature [K]100
Detector technologyCCD
Collection date1999-04-15
DetectorADSC QUANTUM 4
Spacegroup nameH 3
Unit cell lengths83.940, 83.940, 191.160
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution39.900 - 2.600
R-factor0.257
Rwork0.257
R-free0.32000
RMSD bond length0.007
RMSD bond angle1.640

*

Data reduction softwareMOSFLM
Data scaling softwareCCP4 ((SCALA))
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]39.900

*

High resolution limit [Å]2.600

*

2.600

*

Rmerge0.057

*

0.372

*

Total number of observations90533

*

Number of reflections15454

*

Completeness [%]100.0

*

99.8

*

Redundancy5.9

*

2.4

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.429115% PEG 4000, 100 mM Glutamic Acid, 25 mM MgSO4, 50 mM Tris, 2 mM NaN3, 2 mM LDAO , pH 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 18K, temperature 291K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein15 (mg/ml)
21reservoirPEG400015-20 (%)
31reservoir25 (mM)
41reservoirglutamic acid100 (mM)
51reservoirlauryldimethylamine-oxide2 (mM)
61reservoirTris-HCl100 (mM)

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon