Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1DLJ

THE FIRST STRUCTURE OF UDP-GLUCOSE DEHYDROGENASE (UDPGDH) REVEALS THE CATALYTIC RESIDUES NECESSARY FOR THE TWO-FOLD OXIDATION

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X12C
Synchrotron siteNSLS
BeamlineX12C
Temperature [K]100
Detector technologyCCD
Collection date1999-02-20
DetectorBRANDEIS - B4
Spacegroup nameP 4 21 2
Unit cell lengths106.961, 106.961, 81.744
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution27.890 - 1.800
R-factor0.179
Rwork0.179
R-free0.21300
RMSD bond length0.011
RMSD bond angle23.200

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSOLVE
Refinement softwareCNS (0.9)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]27.9001.830
High resolution limit [Å]1.8001.800
Rmerge0.0450.510
Total number of observations176474

*

Number of reflections38487
<I/σ(I)>28.8
Completeness [%]87.3

*

42.4
Redundancy4.62.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.8298ambient temperature

*

Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirammonium sulfate2-2.1 (M)
21reservoirglycerol6-8 (%)
31reservoirTris-HCl100 (mM)

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon