Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1D4D

CRYSTAL STRUCTURE OF THE SUCCINATE COMPLEXED FORM OF THE FLAVOCYTOCHROME C FUMARATE REDUCTASE OF SHEWANELLA PUTREFACIENS STRAIN MR-1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsLURE BEAMLINE DW21B
Synchrotron siteLURE
BeamlineDW21B
Temperature [K]107
Detector technologyIMAGE PLATE
DetectorMARRESEARCH
Spacegroup nameP 43 21 2
Unit cell lengths72.863, 72.863, 216.469
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution8.500 - 2.500
Rwork0.239
R-free0.30500
RMSD bond length0.011

*

RMSD bond angle3.300

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareMLPHARE
Refinement softwareREFMAC
Data quality characteristics
 Overall
Low resolution limit [Å]20.000
High resolution limit [Å]2.500
Rmerge0.053
Total number of observations243545

*

Number of reflections21659
Completeness [%]99.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.5294ammonium sulfate with added ethanol and succinate, bicine, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 21K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirBicine100 (mM)
21reservoirethanol1 (%(v/v))
31reservoirsuccinate100 (mM )or fumarate
41reservoirammonium sulfate2.6 (M)

237423

PDB entries from 2025-06-11

PDB statisticsPDBj update infoContact PDBjnumon