1C9B
CRYSTAL STRUCTURE OF A HUMAN TBP CORE DOMAIN-HUMAN TFIIB CORE DOMAIN COMPLEX BOUND TO AN EXTENDED, MODIFIED ADENOVIRAL MAJOR LATE PROMOTER (ADMLP)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CHESS BEAMLINE F2 |
Synchrotron site | CHESS |
Beamline | F2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 1998-05-15 |
Detector | ADSC QUANTUM 4 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 118.450, 122.298, 140.217 |
Unit cell angles | 90.00, 113.08, 90.00 |
Refinement procedure
Resolution | 50.000 - 2.650 |
R-factor | 0.231 |
Rwork | 0.229 |
R-free | 0.26000 |
RMSD bond length | 0.013 |
RMSD bond angle | 1.580 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (0.4) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.710 |
High resolution limit [Å] | 2.650 | 2.650 |
Rmerge | 0.057 | 0.341 |
Number of reflections | 101892 | |
<I/σ(I)> | 16 | |
Completeness [%] | 97.5 | 85.4 |
Redundancy | 3.98 | 2.25 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 * | 4 * | PEG 8000, TRIS.HCL, AMMONIUM ACETATE, MAGNESIUM CHLORIDE, POTASSIUM CHLORIDE, SODIUM CITRATE, DTT, GLYCEROL, VAPOR DIFFUSION, HANGING DROP, temperature 277.0K |
Crystallization Reagents
ID | crystal ID | solution ID | reagent name | concentration | details |
1 | 1 | 1 | TRIS.HCL | ||
10 | 1 | 2 | PEG 8000 | ||
2 | 1 | 1 | AMMONIUM ACETATE | ||
3 | 1 | 1 | MGCL2 | ||
4 | 1 | 1 | KCL | ||
5 | 1 | 1 | SODIUM CITRATE | ||
6 | 1 | 1 | DTT | ||
7 | 1 | 1 | GLYCEROL | ||
8 | 1 | 1 | PEG 8000 | ||
9 | 1 | 2 | GLYCEROL |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 10 (mg/ml) | |
2 | 1 | reservoir | PEG8000 | 4 (%(w/v)) | |
3 | 1 | reservoir | Tris-HCl | 50 (mM) | |
4 | 1 | reservoir | 50 (mM) | ||
5 | 1 | reservoir | sodium citrate | 100 (mM) | |
6 | 1 | reservoir | glycerol | 10 (%) |