Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1BMB

GRB2-SH2 DOMAIN IN COMPLEX WITH KPFY*VNVEF (PKF270-974)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsENRAF-NONIUS FR591
Temperature [K]293
Detector technologyIMAGE PLATE
Collection date1996-09-19
DetectorMAC Science DIP-2020
Spacegroup nameP 41 21 2
Unit cell lengths51.130, 51.130, 90.250
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution10.000 - 1.800
R-factor0.187
Rwork0.187
R-free0.21800
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1gri
RMSD bond length0.007
RMSD bond angle1.300
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareX-PLOR (3.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]10.0001.830
High resolution limit [Å]1.8001.800
Rmerge0.0740.199
Total number of observations143688

*

Number of reflections11579
<I/σ(I)>11.52.6
Completeness [%]99.999.8
Redundancy8.78.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

6.5PROTEIN (15MG/ML IN 100MM SODIUM CHLORIDE, 0.02% SODIUM AZIDE) WAS CRYSTALLIZED FROM 46% SATURATED AMMONIUM SULFATE, 100MM SODIUM MES PH 6.5, IN PRESENCE OF A 2-FOLD EXCESS OF LIGAND
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein15 (mg/ml)
21drop100 (mM)
31drop0.02 (%)
41reservoirHEPES100 (mM)pH6.5
51reservoirammonium sulfate46 (%sat)

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon