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1B8K

Neurotrophin-3 from Human

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-6A
Synchrotron sitePhoton Factory
BeamlineBL-6A
Temperature [K]100
Detector technologyIMAGE PLATE
DetectorFUJI
Spacegroup nameP 21 21 2
Unit cell lengths38.300, 52.300, 67.700
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 2.150
R-factor0.238
Rwork0.238
R-free0.30200
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1bnf
RMSD bond length0.015
RMSD bond angle2.150
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareX-PLOR
Data quality characteristics
 Overall
Low resolution limit [Å]20.000
High resolution limit [Å]2.150
Rmerge0.047
Number of reflections7414
Completeness [%]82.0
Redundancy2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion

*

8

*

15

*

CRYSTALLIZATION CONDITIONS: 7% ISOPROPANOL 185 MM NACITRATE PH 5.6
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10 (mg/ml)
21dropTris-HCl10 (mM)
31reservoirPEG800022 (%)
41reservoirPIPES100 (mM)
51drop24 amino acid peptide1:2 ratio (NT4 protomer:peptide)

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PDB entries from 2024-05-15

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