13YD
PanDDA analysis group deposition -- Crystal Structure of Enterovirus D68 3Dpol in complex with Z1428159350
This is a non-PDB format compatible entry.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2024-11-15 |
| Detector | DECTRIS EIGER2 XE 9M |
| Wavelength(s) | 0.92203 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 55.471, 83.864, 58.968 |
| Unit cell angles | 90.00, 108.26, 90.00 |
Refinement procedure
| Resolution | 56.000 - 1.740 |
| R-factor | 0.1818 |
| Rwork | 0.180 |
| R-free | 0.21340 |
| Structure solution method | FOURIER SYNTHESIS |
| RMSD bond length | 0.011 |
| RMSD bond angle | 1.598 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.7.7) |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 83.910 | 83.910 | 1.770 |
| High resolution limit [Å] | 1.740 | 9.030 | 1.740 |
| Rmerge | 0.147 | 0.070 | 1.861 |
| Rmeas | 0.160 | 0.078 | 2.096 |
| Rpim | 0.062 | 0.033 | 0.952 |
| Total number of observations | 342597 | 2435 | 13111 |
| Number of reflections | 52634 | 407 | 2756 |
| <I/σ(I)> | 23.3 | 68.4 | 3.9 |
| Completeness [%] | 99.8 | 99.9 | 96.1 |
| Redundancy | 6.5 | 6 | 4.8 |
| CC(1/2) | 0.994 | 0.979 | 0.302 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 289 | 0.1 M TRIS-HCl (pH 8.5), 16% PEG 3350, 16% Isopropanol |
