Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

13TM

Orf9b homodimer in complex with fragment ZINC000020283605

This is a non-PDB format compatible entry.
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.3.1
Synchrotron siteALS
Beamline8.3.1
Temperature [K]100
Detector technologyPIXEL
Collection date2023-10-21
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)1.116
Spacegroup nameP 21 21 21
Unit cell lengths35.878, 64.871, 73.715
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.700 - 1.710
R-factor0.2165
Rwork0.213
R-free0.25510
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.012
RMSD bond angle1.333
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.21.1_5286)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.7001.740
High resolution limit [Å]1.7101.710
Rmerge0.0540.897
Rmeas0.0641.062
Rpim0.0330.558
Total number of observations602123215
Number of reflections18854984
<I/σ(I)>10.51.2
Completeness [%]98.6
Redundancy3.23.3
CC(1/2)0.9980.560
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.529110% PEG3350, 10% PEG1000, 10% MPD, 0.15M Ethylene Glycol, 0.1M MES pH 6.5, 0.1M Imidazole pH 6.5

258735

PDB entries from 2026-08-26

PDB statisticsPDBj update infoContact PDBjnumon