13SA
PanDDA analysis group deposition -- IDOL RING domain in complex with Z1251361039
This is a non-PDB format compatible entry.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2025-02-12 |
| Detector | DECTRIS EIGER2 XE 9M |
| Wavelength(s) | 0.92202 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 44.718, 48.054, 70.644 |
| Unit cell angles | 90.00, 90.85, 90.00 |
Refinement procedure
| Resolution | 70.640 - 1.569 |
| R-factor | 0.2015 |
| Rwork | 0.200 |
| R-free | 0.23410 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 9sa2 |
| RMSD bond length | 0.011 |
| RMSD bond angle | 1.030 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.7.7) |
| Phasing software | REFMAC |
| Refinement software | BUSTER (2.10.4 (23-JAN-2024)) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 70.610 | 70.610 | 1.600 |
| High resolution limit [Å] | 1.570 | 8.450 | 1.570 |
| Rmerge | 0.125 | 0.076 | 2.899 |
| Rmeas | 0.135 | 0.084 | 3.186 |
| Rpim | 0.052 | 0.036 | 1.304 |
| Total number of observations | 286986 | ||
| Number of reflections | 42146 | 1703 | 12281 |
| <I/σ(I)> | 8.9 | 55.1 | 0.4 |
| Completeness [%] | 99.9 | 99.8 | 97.5 |
| Redundancy | 6.8 | 5.7 | 5.8 |
| CC(1/2) | 0.998 | 0.997 | 0.293 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 200 mM Sodium acetate, 100 mM Tris, 30% w/v PEG 4000 |
