13RC
PanDDA analysis group deposition -- Crystal structure of PLpro-C111S in complex with 12P-613
This is a non-PDB format compatible entry.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL10U2 |
| Synchrotron site | SSRF |
| Beamline | BL10U2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2024-04-19 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.97918 |
| Spacegroup name | P 32 2 1 |
| Unit cell lengths | 82.080, 82.080, 135.730 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 27.950 - 2.280 |
| R-factor | 0.1914 |
| Rwork | 0.190 |
| R-free | 0.21670 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 7cjm |
| RMSD bond length | 0.002 |
| RMSD bond angle | 0.539 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.7.7) |
| Phasing software | DIMPLE |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 27.950 | 27.950 | 2.340 |
| High resolution limit [Å] | 2.280 | 10.200 | 2.280 |
| Rmerge | 0.180 | 0.057 | 2.009 |
| Rmeas | 0.185 | 0.060 | 2.062 |
| Rpim | 0.043 | 0.016 | 0.459 |
| Total number of observations | 466088 | 3819 | 36120 |
| Number of reflections | 24758 | 311 | 1809 |
| <I/σ(I)> | 11.9 | 25.9 | 1.9 |
| Completeness [%] | 99.8 | 95.4 | 100 |
| Redundancy | 18.8 | 12.3 | 20 |
| CC(1/2) | 0.998 | 0.998 | 0.838 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6 | 291 | 1.4 M Sodium Maleate pH 6.0 |
