Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

10YY

Crystal Structure of the Chaperonin GroEL apical domain from Bordetella pertussis

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 19-ID
Synchrotron siteNSLS-II
Beamline19-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2026-01-31
DetectorDECTRIS EIGER2 XE 9M
Wavelength(s)0.9786
Spacegroup nameP 64
Unit cell lengths145.768, 145.768, 34.858
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution47.710 - 2.950
R-factor0.2148
Rwork0.213
R-free0.24900
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.006
RMSD bond angle0.788
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((2.0_5936: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.7103.130
High resolution limit [Å]2.9502.950
Rmerge0.1772.224
Rmeas0.1822.278
Rpim0.0410.490
Total number of observations18756431738
Number of reflections92871477
<I/σ(I)>15.31.9
Completeness [%]99.9
Redundancy20.221.5
CC(1/2)0.9990.886
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7291JCSG+ D12: 0.04M Potassium phosphate monobasic, 16% PEG 6000. plate 20567 D12 drop 1, Puck: PSL-1601, Cryo: 80% crystallant + 20% glycerol

250059

PDB entries from 2026-03-04

PDB statisticsPDBj update infoContact PDBjnumon