Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

10PS

Crystal structure of SdrD A2-A3-B1-B2 domains from Staphylococcus aureus JH1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 19-ID
Synchrotron siteNSLS-II
Beamline19-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2025-09-23
DetectorDECTRIS EIGER2 S 9M
Wavelength(s)0.97856
Spacegroup nameP 1 21 1
Unit cell lengths59.190, 58.570, 94.400
Unit cell angles90.00, 101.35, 90.00
Refinement procedure
Resolution27.100 - 2.000
R-factor0.2096
Rwork0.208
R-free0.23540
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.002
RMSD bond angle0.453
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHENIX
Refinement softwarePHENIX (1.21.2_5419)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]27.2002.050
High resolution limit [Å]2.0002.000
Rmerge0.1201.010
Rpim0.0760.876
Number of reflections429032157
<I/σ(I)>8.41.2
Completeness [%]99.699.8
Redundancy3.43.2
CC(1/2)0.9950.645
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72890.1 M Tris-HCl and 20% (w/v) PEG 2000 MME

248942

PDB entries from 2026-02-11

PDB statisticsPDBj update infoContact PDBjnumon