Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

10CY

Crystal structure of Pyrobaculum islandicum Rpp30/Pop5 complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-D
Synchrotron siteAPS
Beamline21-ID-D
Temperature [K]100
Detector technologyCCD
Collection date2016-03-16
DetectorRAYONIX MX-300
Wavelength(s)1.1051
Spacegroup nameP 41 21 2
Unit cell lengths108.217, 108.217, 139.169
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.400 - 2.490
R-factor0.2015
Rwork0.199
R-free0.24400
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.006
RMSD bond angle0.835
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.21.2_5419+SVN)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.4002.600
High resolution limit [Å]2.4902.490
Rmerge0.1311.320
Rmeas0.1421.440
Number of reflections271358812
<I/σ(I)>11.71.5
Completeness [%]91.237.2
Redundancy7.56.5
CC(1/2)0.9960.632
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.5303Crystals were grown from 1-2 mg/ml protein stock solutions at 303 K by vapor diffusion over a narrow range of equilibration solutions optimized around 100 mM Tris-HCl, pH 8.5, 200 mM KCl, 20% (v/v) ethanol. Crystals were cryo-protected by supplementing the crystallization solutions with 25% glycerol (v/v) and subsequently flash frozen with liquid nitrogen.

258735

PDB entries from 2026-08-26

PDB statisticsPDBj update infoContact PDBjnumon