109D
VARIABILITY IN DNA MINOR GROOVE WIDTH RECOGNISED BY LIGAND BINDING: THE CRYSTAL STRUCTURE OF A BIS-BENZIMIDAZOLE COMPOUND BOUND TO THE DNA DUPLEX D(CGCGAATTCGCG)2
Experimental procedure
| Source type | ROTATING ANODE |
| Source details | ENRAF-NONIUS |
| Detector technology | AREA DETECTOR |
| Detector | XENTRONICS |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 24.590, 40.440, 65.760 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 8.000 - 2.000 |
| R-factor | 0.197 |
| Rwork | 0.197 |
| RMSD bond length | 0.020 |
| RMSD bond angle | 4.300 |
| Refinement software | X-PLOR |
Data quality characteristics
| Overall | |
| High resolution limit [Å] | 2.000 * |
| Rmerge | 0.031 * |
| Total number of observations | 11176 * |
| Number of reflections | 4365 * |
| Completeness [%] | 87.0 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | Vapor diffusion * | 7 * | 19 * |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | drop | dodecamer | 0.6 (mM) | |
| 2 | 1 | drop | MPD | 9.9 (%(v/v)) | |
| 3 | 1 | drop | sodium cacodylate | 8.6 (mM) | |
| 4 | 1 | drop | sperine HCl | 0.3 (mM) | |
| 5 | 1 | drop | compund 2 | 1.4 (mM) | |
| 6 | 1 | drop | 12.9 (mM) | ||
| 7 | 1 | reservoir | MPD | 35 (%(v/v)) |






