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Updated PDB entries
9MI0
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BU of 9mi0 by Molmil
61-12A01 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 61_12A01 heavy chain Fv, ...
Authors:Phulera, S, Ozorowski, G, Ward, A.B.
Deposit date:2024-12-12
Release date:2025-05-21
Last modified:2025-08-13
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Precise targeting of HIV broadly neutralizing antibody precursors in humans.
Science, 389, 2025
9MIA
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BU of 9mia by Molmil
206-3G08 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 206-3G08 heavy chain Fv, ...
Authors:Phulera, S, Ozorowski, G, Ward, A.B.
Deposit date:2024-12-12
Release date:2025-05-21
Last modified:2025-08-13
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Precise targeting of HIV broadly neutralizing antibody precursors in humans.
Science, 389, 2025
9MIB
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BU of 9mib by Molmil
206-9C09 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 206-9C09 heavy chain Fv, ...
Authors:Phulera, S, Ozorowski, G, Ward, A.B.
Deposit date:2024-12-12
Release date:2025-05-21
Last modified:2025-08-13
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Precise targeting of HIV broadly neutralizing antibody precursors in humans.
Science, 389, 2025
9MIC
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BU of 9mic by Molmil
Crystal structure of the VRC01-class antibody 4D01, derived from GT1.1 vaccination, in complex with eOD-GT8
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4D01 Fab heavy chain, 4D01 Fab light chain, ...
Authors:Agrawal, S, Wilson, I.A.
Deposit date:2024-12-12
Release date:2025-05-28
Last modified:2025-08-13
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Precise targeting of HIV broadly neutralizing antibody precursors in humans.
Science, 389, 2025
9MID
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BU of 9mid by Molmil
Crystal structure of the VRC01-class antibody 3G08, derived from GT1.1 vaccination, in complex with eOD-GT8
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3G08 Fab Heavy Chain, 3G08 Fab Light Chain, ...
Authors:Agrawal, S, Wilson, I.A.
Deposit date:2024-12-12
Release date:2025-05-28
Last modified:2025-08-13
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Precise targeting of HIV broadly neutralizing antibody precursors in humans.
Science, 389, 2025
9MIF
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BU of 9mif by Molmil
Crystal structure of the VRC01-class antibody 9C09, derived from GT1.1 vaccination, in complex with eOD-GT8
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 9C09 Fab heavy chain, 9C09 Fab light chain, ...
Authors:Agrawal, S, Wilson, I.A.
Deposit date:2024-12-12
Release date:2025-05-28
Last modified:2025-08-13
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Precise targeting of HIV broadly neutralizing antibody precursors in humans.
Science, 389, 2025
9MIH
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BU of 9mih by Molmil
273-4D01 Fab in complex with HIV-1 BG505 SOSIP Env trimer and RM20A3 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 273-4D01 heavy chain Fv, ...
Authors:Phulera, S, Ozorowski, G, Ward, A.B.
Deposit date:2024-12-12
Release date:2025-05-21
Last modified:2025-08-13
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Precise targeting of HIV broadly neutralizing antibody precursors in humans.
Science, 389, 2025
9MII
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BU of 9mii by Molmil
253-7A03 Fab in complex with HIV-1 BG505 SOSIP Env trimer and RM20A3 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 253-7A03 heavy chain Fv, ...
Authors:Phulera, S, Ozorowski, G, Ward, A.B.
Deposit date:2024-12-12
Release date:2025-05-21
Last modified:2025-08-13
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Precise targeting of HIV broadly neutralizing antibody precursors in humans.
Science, 389, 2025
9MIP
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BU of 9mip by Molmil
CryoEM structure of the Protein Phasphatase 2A (Aalpha-B56gamma-Calpha) holoenzyme complex
Descriptor: MANGANESE (II) ION, Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform, Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform, ...
Authors:Day, A, Taylor, D.
Deposit date:2024-12-13
Release date:2025-07-09
Last modified:2025-08-13
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Regulatory mechanisms of PP2A complex assembly driven by physicochemical differences in A-subunit isoforms.
Structure, 2025
9MJ3
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BU of 9mj3 by Molmil
Crystal structure of the VRC01-class antibody 12A01, derived from GT1.1 vaccination, in complex with eOD-GT8
Descriptor: 12A01 Fab heavy chain, 12A01 Fab light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Agrawal, S, Wilson, I.A.
Deposit date:2024-12-13
Release date:2025-05-28
Last modified:2025-08-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Precise targeting of HIV broadly neutralizing antibody precursors in humans.
Science, 389, 2025
9MJ6
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BU of 9mj6 by Molmil
Crystal structure of the VRC01-class antibody 7A03 derived from GT1.1 vaccination
Descriptor: 7A03 Fab heavy chain, 7A03 Fab light chain
Authors:Agrawal, S, Wilson, I.A.
Deposit date:2024-12-13
Release date:2025-05-28
Last modified:2025-08-13
Method:X-RAY DIFFRACTION (3.06 Å)
Cite:Precise targeting of HIV broadly neutralizing antibody precursors in humans.
Science, 389, 2025
9MJC
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BU of 9mjc by Molmil
Crystal structure of the VRC01-class antibody 4D01 derived from GT1.1 vaccination
Descriptor: 4D01 Fab heavy chain, 4D01 Fab light chain
Authors:Agrawal, S, Wilson, I.A.
Deposit date:2024-12-14
Release date:2025-05-28
Last modified:2025-08-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Precise targeting of HIV broadly neutralizing antibody precursors in humans.
Science, 389, 2025
9MJD
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BU of 9mjd by Molmil
Crystal structure of the VRC01-class antibody 3G08
Descriptor: 3G08 Fab heavy chain, 3G08 Fab light chain
Authors:Agrawal, S, Wilson, I.A.
Deposit date:2024-12-14
Release date:2025-05-28
Last modified:2025-08-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Precise targeting of HIV broadly neutralizing antibody precursors in humans.
Science, 389, 2025
9MJI
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BU of 9mji by Molmil
Crystal structure of the VRC01-class antibody 9C09 derived from GT1.1 vaccination
Descriptor: 9C09 Fab heavy chain, 9C09 Fab light chain
Authors:Agrawal, S, Wilson, I.A.
Deposit date:2024-12-15
Release date:2025-05-28
Last modified:2025-08-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Precise targeting of HIV broadly neutralizing antibody precursors in humans.
Science, 389, 2025
9MK4
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BU of 9mk4 by Molmil
Crystal structure of the VRC01-class antibody 12A01 derived from GT1.1 vaccination
Descriptor: 12A01 Fab heavy chain, 12A01 Fab light chain
Authors:Agrawal, S, Wilson, I.A.
Deposit date:2024-12-16
Release date:2025-05-28
Last modified:2025-08-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Precise targeting of HIV broadly neutralizing antibody precursors in humans.
Science, 389, 2025
9MKO
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BU of 9mko by Molmil
4D4 TCR bound to R-phycoerythrin
Descriptor: 4D4 TCR alpha chain, 4D4 TCR beta chain, PHYCOERYTHROBILIN, ...
Authors:Rashleigh, L, Gully, B.S, Rossjohn, J.
Deposit date:2024-12-17
Release date:2025-08-06
Last modified:2025-08-13
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Antibody-like recognition of a gamma delta T cell receptor toward a foreign antigen.
Structure, 2025
9MLG
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BU of 9mlg by Molmil
Xenorhabdus nematophilus XptA2 State 2, 1181insYWK1183, D1182T mutant
Descriptor: XptA2 protein
Authors:Aller, S.G, Martin, C.L.
Deposit date:2024-12-19
Release date:2025-01-15
Last modified:2025-08-13
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Evaluating TcAs for Use in Biotechnology Applications.
BioTech (Basel), 14, 2025
9MNN
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BU of 9mnn by Molmil
Crystal structure of L. monocytogenes MenD with Mg2+ and intermediate I bound
Descriptor: (4S)-4-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3lambda~5~-thiazol-2-yl}-4-hydroxybutanoic acid, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase, MAGNESIUM ION
Authors:Klein, M, Given, F.M, Ho, N.A.T, Allison, T.M, Johnston, J.M.
Deposit date:2024-12-22
Release date:2025-07-30
Last modified:2025-08-13
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Structures of Listeria monocytogenes MenD in ThDP-bound and in-crystallo captured intermediate I-bound forms.
Acta Crystallogr.,Sect.F, 81, 2025
9MSD
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BU of 9msd by Molmil
G002-293-0536 Fab in complex with 001428_T278M_L14 SOSIP and RM20A3 Fab
Descriptor: 001428_T278M_L14 SOSIP gp140, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Phulera, S, Ozorowski, G, Ward, A.B.
Deposit date:2025-01-09
Release date:2025-05-28
Last modified:2025-08-13
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Vaccination with mRNA-encoded nanoparticles drives early maturation of HIV bnAb precursors in humans.
Science, 389, 2025
9MSY
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BU of 9msy by Molmil
G002-480-0546 Fab in complex with V703-0537_T278M_L14 SOSIP and BG18 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG18 Fab heavy chain, ...
Authors:Phulera, S, Ozorowski, G, Ward, A.B.
Deposit date:2025-01-10
Release date:2025-05-28
Last modified:2025-08-13
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Vaccination with mRNA-encoded nanoparticles drives early maturation of HIV bnAb precursors in humans.
Science, 389, 2025
9MVO
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BU of 9mvo by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) in Complex with Inhibitor AVI-4692
Descriptor: (3M,5P,6M)-5-(1H-1,2,3-benzotriazol-1-yl)-6-(3-chlorophenyl)-3-(isoquinolin-4-yl)-1-(prop-2-en-1-yl)pyrimidine-2,4(1H,3H)-dione, (3M,5P,6M)-5-(1H-1,2,3-benzotriazol-1-yl)-6-(3-chlorophenyl)-3-(isoquinolin-4-yl)-1-(prop-2-yn-1-yl)pyrimidine-2,4(1H,3H)-dione, 3C-like proteinase nsp5
Authors:Diallo, A, Gumpena, R, Verba, K.
Deposit date:2025-01-15
Release date:2025-07-23
Last modified:2025-08-13
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structure-based discovery of highly bioavailable, covalent, broad-spectrum coronavirus M Pro inhibitors with potent in vivo efficacy.
Sci Adv, 11, 2025
9MVT
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BU of 9mvt by Molmil
Pfs230 domains 1-8 of the endogenous Pfs230-Pfs48/45 complex
Descriptor: Gametocyte surface protein P230
Authors:Dietrich, M.H, Glukhova, A, Shakeel, S, Tham, W.H.
Deposit date:2025-01-16
Release date:2025-07-30
Last modified:2025-08-13
Method:ELECTRON MICROSCOPY (4.86 Å)
Cite:Cryo-EM structure of endogenous Plasmodium falciparum Pfs230 and Pfs48/45 fertilization complex.
Science, 2025
9MVV
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BU of 9mvv by Molmil
Pfs230 (D9-D14) with Pfs48/45 of the endogenous Pfs230-Pfs48/45 complex
Descriptor: Gametocyte surface protein P230, Gametocyte surface protein P45/48
Authors:Dietrich, M.H, Glukhova, A, Shakeel, S, Tham, W.H.
Deposit date:2025-01-16
Release date:2025-07-30
Last modified:2025-08-13
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:Cryo-EM structure of endogenous Plasmodium falciparum Pfs230 and Pfs48/45 fertilization complex.
Science, 2025
9N1S
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BU of 9n1s by Molmil
Crystal structure of the Transport and Golgi Organization protein 2 Homolog (TANGO2) tetragonal form
Descriptor: CHLORIDE ION, PHOSPHATE ION, Transport and Golgi organization protein 2 homolog
Authors:Lovell, S, Cooper, A, Powers, A, Battaile, K.P, Moshen, A.W, Ghaloul-Gonzalez, L.
Deposit date:2025-01-27
Release date:2025-04-30
Last modified:2025-08-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Crystal Structure of Human Transport and Golgi Organization 2 Homolog (TANGO2) Protein Reveals an alpha beta beta alpha-Fold Arrangement.
Proteins, 2025
9N2D
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BU of 9n2d by Molmil
Cryo-EM structure of an extended F. johnsoniae BAM complex, composite map
Descriptor: (2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-[(2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-5-[(2~{S},3~{S},4~{R},5~{R},6~{R})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-4-[(2~{R},3~{S},4~{R},5~{S},6~{R})-6-[(1~{S})-2-[(2~{S},3~{S},4~{S},5~{S},6~{R})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-1-oxidanyl-ethyl]-3,4-bis(oxidanyl)-5-phosphonooxy-oxan-2-yl]oxy-3-oxidanyl-5-phosphonooxy-oxan-2-yl]oxy-2-carboxy-2-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-5-[[(3~{R})-3-dodecanoyloxytetradecanoyl]amino]-6-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-3-oxidanyl-5-[[(3~{R})-3-oxidanyltetradecanoyl]amino]-4-[(3~{R})-3-oxidanyltetradecanoyl]oxy-6-phosphonooxy-oxan-2-yl]methoxy]-3-phosphonooxy-4-[(3~{R})-3-tetradecanoyloxytetradecanoyl]oxy-oxan-2-yl]methoxy]oxan-4-yl]oxy-4,5-bis(oxidanyl)oxane-2-carboxylic acid, Bam A, Bam D, ...
Authors:Deme, J.C, Lea, S.M.
Deposit date:2025-01-28
Release date:2025-07-09
Last modified:2025-08-13
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:An extended BAM complex in the Bacteroidota
To Be Published

240291

数据于2025-08-13公开中

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