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NMR 拘束データを含む全ての PDB エントリー
6ACV
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the solution NMR structure of MBD domain
分子名称: Methyl-CpG-binding domain-containing protein 11
著者Li, S.L, Feng, Y.Y, Zhou, Y, Ding, Y.M, Liu, K, Nie, Y, Li, F, Yang, Y.Y.
登録日2018-07-27
公開日2019-07-31
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献the solution NMR structure of MBD domains
To Be Published
6AFQ
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BU of 6afq by Molmil
Thanatin M21F in presence of DPC
分子名称: Thanatin
著者Bhattacharjya, S, Sinha, S.
登録日2018-08-08
公開日2019-08-14
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Thanatin M21F in presence of DPC
To Be Published
6AGP
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BU of 6agp by Molmil
Structure of Rac1 in the low-affinity state for Mg2+
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ras-related C3 botulinum toxin substrate 1
著者Toyama, Y, Kontani, K, Katada, T, Shimada, I.
登録日2018-08-13
公開日2019-03-20
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Conformational landscape alternations promote oncogenic activities of Ras-related C3 botulinum toxin substrate 1 as revealed by NMR.
Sci Adv, 5, 2019
6AHZ
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The NMR Structure of the Polysialyltranseferase Domain (PSTD) in Polysialyltransferase ST8siaIV
分子名称: CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase
著者Liu, X.H, Lu, B, Peng, L.X, Liao, S.M, Zhou, F, Chen, D, Lu, Z.L, Zhou, G.P, Huang, R.B.
登録日2018-08-21
公開日2018-10-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The Inhibition of Polysialyltranseferase ST8SiaIV Through Heparin Binding to Polysialyltransferase Domain (PSTD).
Med Chem, 15, 2019
6AK0
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Solution NMR structure of a new lasso peptide specialicin
分子名称: CYS-LEU-GLY-VAL-GLY-SER-CYS-VAL-ASP-PHE-ALA-GLY-CYS-GLY-TYR-ALA-VAL-VAL-CYS-PHE-DTR
著者Hemmi, H, Kodani, S, Kaweewan, I, Komaki, H.
登録日2018-08-28
公開日2018-12-05
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Isolation and structure determination of a new lasso peptide specialicin based on genome mining
Bioorg. Med. Chem., 26, 2018
6ALI
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BU of 6ali by Molmil
Solution NMR structure of a putative thioredoxin (ECH_0218) in the oxidized state from Ehrlichia chaffeensis, the etiological agent responsible for human monocytic ehrlichiosis. Seattle Structural Genomics Center for Infectious Disease target EhchA.00546.a
分子名称: Thioredoxin
著者Buchko, G.W, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2017-08-08
公開日2017-09-06
最終更新日2024-10-09
実験手法SOLUTION NMR
主引用文献Solution NMR structures of oxidized and reduced Ehrlichia chaffeensis thioredoxin: NMR-invisible structure owing to backbone dynamics.
Acta Crystallogr F Struct Biol Commun, 74, 2018
6ALK
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BU of 6alk by Molmil
NMR solution structure of the major beech pollen allergen Fag s 1
分子名称: Fag s 1 pollen allergen
著者Moraes, A.H, Asam, A, Almeida, F.C.L, Wallner, M, Ferreira, F, Valente, A.P.
登録日2017-08-08
公開日2018-08-08
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural basis for cross-reactivity and conformation fluctuation of the major beech pollen allergen Fag s 1.
Sci Rep, 8, 2018
6ALS
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Solution structure of a DNA dodecamer with 5-methylcytosine at the 3rd and 9th position and 8-oxoguanine at the 4th position
分子名称: DNA (5'-D(*(DC5)P*GP*(DMC)P*(8OG)P*AP*AP*TP*TP*(DMC)P*GP*CP*(DG3))-3')
著者Gruber, D.R, Shernyukov, A.V, Endutkin, A.V, Bagryanskaya, E.G, Zharkov, D.O, Smirnov, S.L.
登録日2017-08-08
公開日2017-09-06
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Oxidative damage to epigenetically methylated sites affects DNA stability, dynamics and enzymatic demethylation.
Nucleic Acids Res., 46, 2018
6ALT
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Solution structure of a DNA dodecamer with 5-methylcytosine at the 3rd and 9th position
分子名称: DNA (5'-D(*(DC5)P*GP*(DMC)P*GP*AP*AP*TP*TP*(DMC)P*GP*CP*(DG3))-3')
著者Gruber, D.R, Hoppins, J.J, Miears, H.L, Zharkov, D.O, Smirnov, S.L.
登録日2017-08-08
公開日2017-09-20
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Oxidative damage to epigenetically methylated sites affects DNA stability, dynamics and enzymatic demethylation.
Nucleic Acids Res., 46, 2018
6ALU
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BU of 6alu by Molmil
Solution structure of a DNA dodecamer with 5-methylcytosine at the 3rd and 8-oxoguanine at the 4th position
分子名称: DNA (5'-D(*(DC5)P*GP*(DMC)P*(8OG)P*AP*AP*TP*TP*CP*GP*CP*(DG3))-3')
著者Gruber, D.R, Shernyukov, A.V, Endutkin, A.V, Bagryanskaya, E.G, Zharkov, D.O, Smirnov, S.L.
登録日2017-08-08
公開日2017-09-06
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Oxidative damage to epigenetically methylated sites affects DNA stability, dynamics and enzymatic demethylation.
Nucleic Acids Res., 46, 2018
6ALY
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Solution structure of yeast Med15 ABD2 residues 277-368
分子名称: Mediator of RNA polymerase II transcription subunit 15
著者Tuttle, L.M, Pacheco, D, Warfield, L, Hahn, S, Klevit, R.E.
登録日2017-08-08
公開日2018-03-21
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Gcn4-Mediator Specificity Is Mediated by a Large and Dynamic Fuzzy Protein-Protein Complex.
Cell Rep, 22, 2018
6AMR
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BU of 6amr by Molmil
Solution NMR structure of a putative thioredoxin (ECH_0218) in the reduced state from Ehrlichia chaffeensis, the etiological agent responsible for human monocytic ehrlichiosis. Seattle Structural Genomics Center for Infectious Disease target EhchA.00546.a
分子名称: Thioredoxin
著者Buchko, G.W, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2017-08-11
公開日2017-09-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution NMR structures of oxidized and reduced Ehrlichia chaffeensis thioredoxin: NMR-invisible structure owing to backbone dynamics.
Acta Crystallogr F Struct Biol Commun, 74, 2018
6AMV
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Abl 1b Regulatory Module 'inhibiting state'
分子名称: Tyrosine-protein kinase ABL1
著者Kalodimos, C.G, Saleh, T, Rossi, P.
登録日2017-08-11
公開日2017-09-27
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Atomic view of the energy landscape in the allosteric regulation of Abl kinase.
Nat. Struct. Mol. Biol., 24, 2017
6AMW
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Abl1b Regulatory Module 'Activating' conformation
分子名称: Tyrosine-protein kinase ABL1
著者Kalodimos, C.G, Rossi, P, Saleh, T.
登録日2017-08-11
公開日2017-09-27
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Atomic view of the energy landscape in the allosteric regulation of Abl kinase.
Nat. Struct. Mol. Biol., 24, 2017
6ANF
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Design of a short thermo-stable alpha-helix embedded in a macrocycle
分子名称: 3,3'-dimethyl-1,1'-biphenyl, Capped-strapped peptide
著者Wu, H, Acharyya, A, Wu, Y, Liu, L, Jo, H, Gai, F, DeGrado, W.F.
登録日2017-08-13
公開日2018-02-21
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Design of a Short Thermally Stable alpha-Helix Embedded in a Macrocycle.
Chembiochem, 19, 2018
6AP5
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H, 13C, and 15N Chemical Shift Assignments and structure of Thioredoxin from Mycobacterium thermoresistibile ATCC 19527 and NCTC 10409
分子名称: Thioredoxin
著者Tang, C.T, Yang, F.Y, Varani, G.V, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2017-08-17
公開日2017-10-25
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献H, 13C, and 15N Chemical Shift Assignments and structure of Thioredoxin from Mycobacterium thermoresistibile ATCC 19527 and NCTC 10409
To Be Published
6ASF
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BU of 6asf by Molmil
NMR and Restrained Molecular Dynamics Determination of the Structure of an Aza-Benzimidazole Derivative Complex with the DNA Minor Groove of an -AAGATA- Sequence
分子名称: DNA (5'-D(*CP*CP*AP*AP*GP*AP*TP*AP*G)-3'), DNA (5'-D(*CP*TP*AP*TP*CP*TP*TP*GP*G)-3')
著者Harika, N.K, Germann, M.W, Boykin, D.W.
登録日2017-08-24
公開日2018-01-31
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献First Structure of a Designed Minor Groove Binding Heterocyclic Cation that Specifically Recognizes Mixed DNA Base Pair Sequences.
Chemistry, 23, 2017
6AST
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NMR and Restrained Molecular Dynamics Determination of the Structure of an Aza-Benzimidazole Derivative Complex with the DNA Minor Groove of an -AAGATA Sequence
分子名称: DNA (5'-D(*CP*CP*AP*AP*GP*AP*TP*AP*G)-3'), DNA (5'-D(*CP*TP*AP*TP*CP*TP*TP*GP*G)-3'), amino(4-{[(2-{4-[amino(iminio)methyl]phenyl}-3H-imidazo[4,5-b]pyridin-5-yl)oxy]methyl}phenyl)methaniminium
著者Harika, N.K, Germann, M.W, Wilson, W.D.
登録日2017-08-25
公開日2018-01-31
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献First Structure of a Designed Minor Groove Binding Heterocyclic Cation that Specifically Recognizes Mixed DNA Base Pair Sequences.
Chemistry, 23, 2017
6AWK
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BU of 6awk by Molmil
PawL-Derived Peptide PLP-12
分子名称: PLP-12
著者Fisher, M, Mylne, J.S, Howard, M.J.
登録日2017-09-05
公開日2018-03-07
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献A family of small, cyclic peptides buried in preproalbumin since the Eocene epoch.
Plant Direct, 2, 2018
6AWM
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BU of 6awm by Molmil
PawL-Derived Peptide PLP-4
分子名称: GLY-LEU-LEU-GLY-ILE-THR-ASP
著者Fisher, M, Mylne, J.S, Howard, M.J.
登録日2017-09-05
公開日2018-03-07
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献A family of small, cyclic peptides buried in preproalbumin since the Eocene epoch.
Plant Direct, 2, 2018
6AX2
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BU of 6ax2 by Molmil
Solution structure of Magi3 a specific insect toxin from the spider Macrothele gigas
分子名称: Mu-hexatoxin-Mg2a
著者del Rio-Portilla, F, Titaux-Delgado, G.A, Escobedo-Gonzalez, F.C.
登録日2017-09-06
公開日2018-01-10
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Successful refolding and NMR structure of rMagi3: A disulfide-rich insecticidal spider toxin.
Protein Sci., 27, 2018
6AX5
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RPT1 region of INI1/SNF5/SMARCB1_HUMAN - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.
分子名称: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
著者Girvin, M.E, Cahill, S.M, Harris, R, Cowburn, D, Spira, M, Wu, X, Prakash, R, Bernowitz, M, Almo, S.C, Kalpana, G.V.
登録日2017-09-06
公開日2017-10-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献INI1/SMARCB1 Rpt1 domain mimics TAR RNA in binding to integrase to facilitate HIV-1 replication.
Nat Commun, 12, 2021
6AXD
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Structures of REV1 UBM2 domain complex with ubiquitin and with the first small-molecule that inhibits the REV1 UBM2-ubiquitin interaction
分子名称: DNA repair protein REV1
著者Fujii, N, Vanarotti, M.
登録日2017-09-06
公開日2018-06-27
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structures of REV1 UBM2 Domain Complex with Ubiquitin and with a Small-Molecule that Inhibits the REV1 UBM2-Ubiquitin Interaction.
J. Mol. Biol., 430, 2018
6AXI
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PawL-Derived Peptide PLP-2
分子名称: ASP-LEU-PHE-VAL-PRO-PRO-ILE-ASP
著者Fisher, M, Mylne, J.S, Howard, M.J.
登録日2017-09-06
公開日2018-03-07
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A family of small, cyclic peptides buried in preproalbumin since the Eocene epoch.
Plant Direct, 2, 2018
6AZA
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BU of 6aza by Molmil
NMR structure of sea anemone toxin Kappa-actitoxin-Ate1a
分子名称: ARG-CYS-LYS-THR-CYS-SER-LYS-GLY-ARG-CYS-ARG-PRO-LYS-PRO-ASN-CYS-GLY-NH2
著者Chin, Y.K.-Y, Madio, B, King, G.F, Undheim, E.A.B.
登録日2017-09-10
公開日2018-09-12
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献PHAB toxins: a unique family of predatory sea anemone toxins evolving via intra-gene concerted evolution defines a new peptide fold.
Cell. Mol. Life Sci., 75, 2018

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