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新しい PDB エントリー
8V3M
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BU of 8v3m by Molmil
CCP5 apo structure
分子名称: Cytosolic carboxypeptidase-like protein 5, D-MALATE, IMIDAZOLE, ...
著者Chen, J, Zehr, E.A, Gruschus, J.M, Szyk, A, Liu, Y, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
登録日2023-11-28
公開日2024-07-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Tubulin code eraser CCP5 binds branch glutamates by substrate deformation
Nature, 2024
8V3N
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BU of 8v3n by Molmil
CCP5 in complex with Glu-P-Glu transition state analog
分子名称: (2S)-2-{[(S)-[(3S)-3-acetamido-4-(ethylamino)-4-oxobutyl](hydroxy)phosphoryl]methyl}pentanedioic acid, Cytosolic carboxypeptidase-like protein 5, D-MALATE, ...
著者Chen, J, Zehr, E.A, Gruschus, J.M, Szyk, A, Liu, Y, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
登録日2023-11-28
公開日2024-07-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Tubulin code eraser CCP5 binds branch glutamates by substrate deformation
Nature, 2024
8V3O
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BU of 8v3o by Molmil
CCP5 in complex with Glu-P-peptide 1 transition state analog
分子名称: Cytosolic carboxypeptidase-like protein 5, D-MALATE, POTASSIUM ION, ...
著者Chen, J, Zehr, E.A, Gruschus, J.M, Szyk, A, Liu, Y, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
登録日2023-11-28
公開日2024-07-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Tubulin code eraser CCP5 binds branch glutamates by substrate deformation
Nature, 2024
8V3P
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BU of 8v3p by Molmil
CCP5 in complex with Glu-P-peptide 2 transition state analog
分子名称: Cytosolic carboxypeptidase-like protein 5, Tubulin beta-2A chain, ZINC ION
著者Chen, J, Zehr, E.A, Gruschus, J.M, Szyk, A, Liu, Y, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
登録日2023-11-28
公開日2024-07-17
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Tubulin code eraser CCP5 binds branch glutamates by substrate deformation
Nature, 2024
8V3Q
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BU of 8v3q by Molmil
Structure of CCP5 class1
分子名称: Cytosolic carboxypeptidase-like protein 5, GLUTAMIC ACID, ZINC ION, ...
著者Chen, J, Zehr, E.A, Gruschus, J.M, Szyk, A, Liu, Y, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
登録日2023-11-28
公開日2024-07-17
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Tubulin code eraser CCP5 binds branch glutamates by substrate deformation
Nature, 2024
8V3R
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BU of 8v3r by Molmil
Structure of CCP5 class2
分子名称: Cytosolic carboxypeptidase-like protein 5, GLUTAMIC ACID, ZINC ION, ...
著者Chen, J, Zehr, E.A, Gruschus, J.M, Szyk, A, Liu, Y, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
登録日2023-11-28
公開日2024-07-17
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Tubulin code eraser CCP5 binds branch glutamates by substrate deformation
Nature, 2024
8V3S
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BU of 8v3s by Molmil
Structure of CCP5 class3
分子名称: Cytosolic carboxypeptidase-like protein 5, GLUTAMIC ACID, ZINC ION, ...
著者Chen, J, Zehr, E.A, Gruschus, J.M, Szyk, A, Liu, Y, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
登録日2023-11-28
公開日2024-07-17
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Tubulin code eraser CCP5 binds branch glutamates by substrate deformation
Nature, 2024
8V4K
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BU of 8v4k by Molmil
CCP5 in complex with microtubules class1
分子名称: Cytosolic carboxypeptidase-like protein 5, GLUTAMIC ACID, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Chen, J, Zehr, E.A, Gruschus, J.M, Szyk, A, Liu, Y, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
登録日2023-11-29
公開日2024-07-17
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Tubulin code eraser CCP5 binds branch glutamates by substrate deformation
Nature, 2024
8V4L
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CCP5 in complex with microtubules class2
分子名称: Cytosolic carboxypeptidase-like protein 5, GLUTAMIC ACID, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Chen, J, Zehr, E.A, Gruschus, J.M, Szyk, A, Liu, Y, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
登録日2023-11-29
公開日2024-07-17
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Tubulin code eraser CCP5 binds branch glutamates by substrate deformation
Nature, 2024
8V4M
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CCP5 in complex with microtubules class3
分子名称: Cytosolic carboxypeptidase-like protein 5, GLUTAMIC ACID, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Chen, J, Zehr, E.A, Gruschus, J.M, Szyk, A, Liu, Y, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
登録日2023-11-29
公開日2024-07-17
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Tubulin code eraser CCP5 binds branch glutamates by substrate deformation
Nature, 2024
8V7Z
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BU of 8v7z by Molmil
Phosphorylated, ATP-bound, E1371Q human cystic fibrosis transmembrane conductance regulator (E1371Q-CFTR)
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, ADENOSINE-5'-TRIPHOSPHATE, CHOLESTEROL, ...
著者Gao, X, Hwang, T.
登録日2023-12-04
公開日2024-07-17
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Allosteric inhibition of CFTR gating by CFTRinh-172 binding in the pore
Nat Commun, 2024
8V81
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Phosphorylated, ATP-bound, inhibitor 172-bound E1371Q human cystic fibrosis transmembrane conductance regulator
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 4-[(Z)-{(3M)-4-oxo-2-sulfanylidene-3-[3-(trifluoromethyl)phenyl]-1,3-thiazolidin-5-ylidene}methyl]benzoic acid, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Gao, X, Hwang, T.
登録日2023-12-04
公開日2024-07-17
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Allosteric inhibition of CFTR gating by CFTRinh-172 binding in the pore
Nat Commun, 2024
8VD7
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BU of 8vd7 by Molmil
MicroED structure of SARS-CoV-2 main protease (MPro/3CLPro) with missing cone eliminated by suspended drop
分子名称: 3C-like proteinase nsp5, CHLORIDE ION
著者Bu, G, Gillman, C, Danelius, E, Hattne, J, Nannenga, B.L, Gonen, T.
登録日2023-12-14
公開日2024-07-17
実験手法ELECTRON CRYSTALLOGRAPHY (2.15 Å)
主引用文献Eliminating the missing cone challenge through innovative approaches.
J Struct Biol X, 9, 2024
8VEI
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BU of 8vei by Molmil
De novo designed colic acid binder CHD_r1
分子名称: CHD_r1
著者Bera, A.K, An, L, Baker, D.
登録日2023-12-19
公開日2024-07-17
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Binding and sensing diverse small molecules using shape complementary pseudocycles
To Be Published
8VEJ
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BU of 8vej by Molmil
De novo designed cholic acid binder: CHD_buttress
分子名称: CHD_buttress, CHOLIC ACID
著者Bera, A.K, Tran, L, Kang, A, Baker, D.
登録日2023-12-19
公開日2024-07-17
実験手法X-RAY DIFFRACTION (3.59 Å)
主引用文献Binding and sensing diverse small molecules using shape complementary pseudocycles
To Be Published
8VJ1
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BU of 8vj1 by Molmil
Structure of C-terminal domain of telomere resolvase, ResT, from Borrelia garinii
分子名称: Telomere resolvase ResT
著者Semper, C, Savchenko, A, Watanabe, N, Center for Structural Biology of Infectious Diseases (CSBID)
登録日2024-01-05
公開日2024-07-17
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Structure analysis of the telomere resolvase from the Lyme disease spirochete Borrelia garinii reveals functional divergence of its C-terminal domain.
Nucleic Acids Res., 2024
8VKA
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BU of 8vka by Molmil
Crystal structure of Plasmodium vivax glycylpeptide N-tetradecanoyltransferase (N-myristoyltransferase, NMT) bound to myristoyl-CoA and inhibitor 9c
分子名称: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, CHLORIDE ION, GLYCEROL, ...
著者Fenwick, M.K, Staker, B.L, Phan, I.Q, Early, J, Myler, P.J, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2024-01-08
公開日2024-07-17
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Exploring Subsite Selectivity within Plasmodium vivax N -Myristoyltransferase Using Pyrazole-Derived Inhibitors.
J.Med.Chem., 67, 2024
8VKB
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Crystal structure of Plasmodium vivax glycylpeptide N-tetradecanoyltransferase (N-myristoyltransferase, NMT) bound to myristoyl-CoA and inhibitor 10b
分子名称: CHLORIDE ION, GLYCEROL, Glycylpeptide N-tetradecanoyltransferase, ...
著者Fenwick, M.K, Staker, B.L, Phan, I.Q, Early, J, Myler, P.J, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2024-01-08
公開日2024-07-17
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Exploring Subsite Selectivity within Plasmodium vivax N -Myristoyltransferase Using Pyrazole-Derived Inhibitors.
J.Med.Chem., 67, 2024
8VKC
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BU of 8vkc by Molmil
Crystal structure of dehaloperoxidase A in complex with substrate 4-nitrophenol
分子名称: Dehaloperoxidase A, GLYCEROL, P-NITROPHENOL, ...
著者Aktar, M.S, de Serrano, V.S, Ghiladi, R.A, Franzen, S.
登録日2024-01-08
公開日2024-07-17
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Structural Comparison of Substrate Binding Sites in Dehaloperoxidase A and B.
Biochemistry, 2024
8VKD
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Crystal structure of dehaloperoxidase A in complex with substrate 4-nitrocatechol
分子名称: 4-NITROCATECHOL, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
著者Aktar, M.S, de Serrano, V.S, Ghiladi, R.A, Franzen, S.
登録日2024-01-08
公開日2024-07-17
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural Comparison of Substrate Binding Sites in Dehaloperoxidase A and B.
Biochemistry, 2024
8VNU
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Homing endonuclease H98A I-PpoI-DNA complex at pH6.0 (K+ MES) with 70 mM Tl+ for 1800s
分子名称: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*AP*GP*TP*CP*A)-3'), GLYCEROL, Intron-encoded endonuclease I-PpoI, ...
著者Chang, C, Gao, Y.
登録日2024-01-13
公開日2024-07-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s
To Be Published
8VS5
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Structure of catalytic domain of telomere resolvase, ResT, from Borrelia garinii
分子名称: Telomere resolvase ResT
著者Semper, C, Savchenko, A, Watanabe, N, Center for Structural Biology of Infectious Diseases (CSBID)
登録日2024-01-23
公開日2024-07-17
実験手法X-RAY DIFFRACTION (2.796 Å)
主引用文献Structure analysis of the telomere resolvase from the Lyme disease spirochete Borrelia garinii reveals functional divergence of its C-terminal domain.
Nucleic Acids Res., 2024
8VSK
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Crystal structure of Dehaloperoxidase A in complex with substrate 2,4-dibromophenol
分子名称: 2,4-bis(bromanyl)phenol, DI(HYDROXYETHYL)ETHER, Dehaloperoxidase A, ...
著者Aktar, M.S, de Serrano, V.S, Ghiladi, R.A, Franzen, S.
登録日2024-01-24
公開日2024-07-17
実験手法X-RAY DIFFRACTION (1.515 Å)
主引用文献Structural Comparison of Substrate Binding Sites in Dehaloperoxidase A and B.
Biochemistry, 2024
8VVK
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CCHFV GP38 bound to ADI-46143 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ADI-46143 Fab Heavy Chain, ADI-46143 Fab Light Chain, ...
著者Hjorth, C.K, McLellan, J.S.
登録日2024-01-31
公開日2024-07-17
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Crimean-Congo Hemorrhagic Fever Survivors Elicit Protective Non-Neutralizing Antibodies that Target 11 Overlapping Regions on Viral Glycoprotein GP38
To Be Published
8VVL
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CCHFV GP38 bound to c13G8 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
著者Hjorth, C.K, Mishra, A.K, McLellan, J.S.
登録日2024-01-31
公開日2024-07-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crimean-Congo Hemorrhagic Fever Survivors Elicit Protective Non-Neutralizing Antibodies that Target 11 Overlapping Regions on Viral Glycoprotein GP38
To Be Published

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件を2024-07-17に公開中

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