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新しい PDB エントリー
8ZWK
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BU of 8zwk by Molmil
Polyadenylic acid bound alpha-synuclein fibril Polymorph 2
分子名称: Alpha-synuclein, RNA (5'-R(P*AP*AP*A)-3')
著者Tao, Y.Q, Liu, C, Li, D.
登録日2024-06-13
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Polyadenylic acid bound alpha-synuclein fibril Polymorph 2
To Be Published
8ZWL
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BU of 8zwl by Molmil
Heparin bound Tau fibril polymorph 3
分子名称: Isoform Tau-F of Microtubule-associated protein tau
著者Tao, Y.Q, Liu, C, Li, D.
登録日2024-06-13
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Heparin bound Tau fibril polymorph 3
To Be Published
8ZWM
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BU of 8zwm by Molmil
Heparin bound Tau fibril polymorph 4
分子名称: Isoform Tau-F of Microtubule-associated protein tau
著者Tao, Y.Q, Liu, C, Li, D.
登録日2024-06-13
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Heparin bound Tau fibril polymorph 4
To Be Published
8ZWV
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BU of 8zwv by Molmil
The Crystal Structure of carbonic anhydrase II from Biortus.
分子名称: 1,2-ETHANEDIOL, Carbonic anhydrase 2, ZINC ION, ...
著者Wang, F, Cheng, W, Lv, Z, Ju, C, Bao, C.
登録日2024-06-13
公開日2024-07-03
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The Crystal Structure of carbonic anhydrase II from Biortus.
To Be Published
8ZX6
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BU of 8zx6 by Molmil
Heparin bound Tau fibril PHF
分子名称: Isoform Tau-F of Microtubule-associated protein tau
著者Tao, Y.Q, Liu, C, Li, D.
登録日2024-06-13
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Heparin bound Tau fibril PHF
To Be Published
9AT8
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BU of 9at8 by Molmil
Fab 77-stabilized MeV F ectodomain fragment
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F0, mAB 77 heavy chain, ...
著者Zyla, D, Saphire, E.O.
登録日2024-02-26
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献A neutralizing antibody prevents postfusion transition of measles virus fusion protein
Science, 2024
9B8P
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BU of 9b8p by Molmil
Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 3, V1
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit D, H(+)-transporting two-sector ATPase, ...
著者Coupland, E.M, Rubinstein, J.L.
登録日2024-03-31
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献High-resolution electron cryomicroscopy of V-ATPase in native synaptic vesicles.
Science, 2024
9BAF
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BU of 9baf by Molmil
Solution NMR structure of conofurin-Delta
分子名称: Alpha-conotoxin LvIA
著者Harvey, P.J, Craik, D.J, Hone, A.J, McIntosh, J.M.
登録日2024-04-04
公開日2024-07-03
実験手法SOLUTION NMR
主引用文献Design, Synthesis, and Structure-Activity Relationships of Novel Peptide Derivatives of the Severe Acute Respiratory Syndrome-Coronavirus-2 Spike-Protein that Potently Inhibit Nicotinic Acetylcholine Receptors.
J.Med.Chem., 67, 2024
9BBB
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Human CYP3A4 bound to an inhibitor
分子名称: Cytochrome P450 3A4, PROTOPORPHYRIN IX CONTAINING FE, cobicistat
著者Sevrioukova, I.F.
登録日2024-04-05
公開日2024-07-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Interaction of CYP3A4 with the inhibitor cobicistat: Structural and mechanistic insights and comparison with ritonavir
to be published
9BC2
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Transglutaminase 2 - Open State
分子名称: CHLORIDE ION, HB-225 (gluten peptidomimetic TG2 inhibitor), Protein-glutamine gamma-glutamyltransferase 2, ...
著者Mathews, I.I, Sewa, A, Khosla, C.
登録日2024-04-07
公開日2024-07-03
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural and Mechanistic Analysis of Ca2+ Dependent Regulation of Transglutaminase 2 Activity using a Ca2+ Bound Intermediate State
Proc.Natl.Acad.Sci.USA, 2024
9BC3
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Transglutaminase 2 - Alternate state
分子名称: CALCIUM ION, HB-225 (gluten peptidomimetic TG2 inhibitor), Protein-glutamine gamma-glutamyltransferase 2
著者Mathews, I.I, Sewa, A.S, Khosla, C.
登録日2024-04-07
公開日2024-07-03
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Structural and Mechanistic Analysis of Ca2+ Dependent Regulation of Transglutaminase 2 Activity using a Ca2+ Bound Intermediate State
Proc.Natl.Acad.Sci.USA, 2024
9BC4
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Transglutaminase 2 - Intermediate State
分子名称: CALCIUM ION, GLYCEROL, HB-225 (gluten peptidomimetic TG2 inhibitor), ...
著者Sewa, A.S, Mathews, I.I, Khosla, C.
登録日2024-04-07
公開日2024-07-03
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structural and Mechanistic Analysis of Ca2+ Dependent Regulation of Transglutaminase 2 Activity using a Ca2+ Bound Intermediate State
Proc.Natl.Acad.Sci.USA, 2024
9BGP
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BU of 9bgp by Molmil
X-ray structure of the aminotransferase from Vibrio vulnificus responsible for the biosynthesis of 2,3-diacetamido-4-amino-2,3,4-trideoxy-arabinose in the presence of its internal aldimine
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, aminotransferase
著者Fait, D.J, Thoden, J.B, Holden, H.M.
登録日2024-04-19
公開日2024-07-03
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Biochemical Investigation of an Aminotransferase Required for the Production of 2,3,4-triacetamido-2,3,4-trideoxy-L-arabinose
To Be Published
9BGR
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BU of 9bgr by Molmil
X-ray structure of the aminotransferase from Vibrio vulnificus responsible for the biosynthesis of 2,3-diacetamido-4-amino-2,3,4-trideoxy-arabinose in the presence of its external aldimine with 2,3-diacetamido-4-amino-2,3,4-trideoxy-l-arabinose
分子名称: (2R,3R,4R,5R)-3,4-diacetamido-5-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methoxy)oxan-2-yl [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxyoxolan-2-yl]methyl dihydrogen diphosphate (non-preferred name), 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
著者Fait, D.J, Thoden, J.B, Holden, H.M.
登録日2024-04-19
公開日2024-07-03
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Biochemical Investigation of an Aminotransferase Required for the Production of 2,3,4-triacetamido-2,3,4-trideoxy-L-arabinose
To Be Published
9BJA
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C. difficile Tcdb cysteine protease domain in complex with IP6
分子名称: INOSITOL HEXAKISPHOSPHATE, Toxin B
著者Veyron, S, Cummer, R.
登録日2024-04-25
公開日2024-07-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-activity relationship of inositol thiophosphate analogs as allosteric activators of Clostridioides difficile Toxin B
Chemrxiv, 2024
9BKM
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DHODH in complex with Ligand 10
分子名称: (2M,6P)-2-(2-chloro-6-fluorophenyl)-6-[4-ethyl-3-(hydroxymethyl)-5-oxo-4,5-dihydro-1H-1,2,4-triazol-1-yl]-7-fluoro-4-(propan-2-yl)isoquinolin-1(2H)-one, ACETATE ION, Dihydroorotate dehydrogenase (quinone), ...
著者Shaffer, P.L.
登録日2024-04-29
公開日2024-07-03
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Discovery of JNJ-74856665: A Novel Isoquinolinone DHODH Inhibitor for the Treatment of AML.
J.Med.Chem., 2024
9BKN
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DHODH in complex with Ligand 16
分子名称: (2P,6P)-6-[4-ethyl-3-(hydroxymethyl)-5-oxo-4,5-dihydro-1H-1,2,4-triazol-1-yl]-7-fluoro-2-(2-methylphenyl)-4-(propan-2-yl)isoquinolin-1(2H)-one, ACETATE ION, CHLORIDE ION, ...
著者Shaffer, P.L.
登録日2024-04-29
公開日2024-07-03
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Discovery of JNJ-74856665: A Novel Isoquinolinone DHODH Inhibitor for the Treatment of AML.
J.Med.Chem., 2024
9BKO
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DHODH in complex with Ligand 26
分子名称: (2P,6P)-6-[4-ethyl-3-(hydroxymethyl)-5-oxo-4,5-dihydro-1H-1,2,4-triazol-1-yl]-7-fluoro-2-(2-methylphenyl)-4-[(2R)-1,1,1-trifluoropropan-2-yl]isoquinolin-1(2H)-one, ACETATE ION, CHLORIDE ION, ...
著者Shaffer, P.L.
登録日2024-04-29
公開日2024-07-03
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Discovery of JNJ-74856665: A Novel Isoquinolinone DHODH Inhibitor for the Treatment of AML.
J.Med.Chem., 2024
9BQV
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BU of 9bqv by Molmil
DdmD dimer apoprotein
分子名称: Helicase/UvrB N-terminal domain-containing protein
著者Bravo, J.P.K, Taylor, D.W.
登録日2024-05-10
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Plasmid targeting and destruction by the DdmDE bacterial defence system.
Nature, 2024
9C0O
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Crystal structure of DmCfp1 PHD finger bound to H3K4me3
分子名称: CXXC-type zinc finger protein 1, DIMETHYL SULFOXIDE, Histone H3.3C, ...
著者Gregoire, S, Couture, J.F.
登録日2024-05-27
公開日2024-07-03
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Structural insights into an atypical histone binding mechanism by a PHD finger.
to be published
9C61
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Crystal structure of the human LRRK2 WDR domain in complex with CACHE1193-26
分子名称: (4R)-4-[4-(5-fluoro-1H-indol-3-yl)piperidine-1-carbonyl]piperidin-2-one, Non-specific serine/threonine protein kinase, UNKNOWN ATOM OR ION
著者Zeng, H, Dong, A, Kutera, M, Ilyassov, O, Seitova, A, Loppnau, P, Schapira, M, Arrowsmith, C.H, Edwards, A.M, Halabelian, L.
登録日2024-06-07
公開日2024-07-03
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of the human LRRK2 WDR domain in complex with CACHE1193-26
To be published
9C82
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Structure of human ULK1C:PI3KC3-C1 supercomplex
分子名称: Beclin 1-associated autophagy-related key regulator, Beclin-1, Phosphatidylinositol 3-kinase catalytic subunit type 3, ...
著者Chen, M, Hurley, J.H.
登録日2024-06-11
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (6.84 Å)
主引用文献Structure and activation of the human autophagy-initiating ULK1C:PI3KC3-C1 supercomplex
bioRxiv, 2023
9C8R
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CryoEM structure of Apo Cryptococcus neoformans H99 Acetyl-CoA Synthetase
分子名称: Acetyl-coenzyme A synthetase
著者Xu, Z, Schnicker, N.J, Jezeski, A.J, Krysan, D.J.
登録日2024-06-12
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (2.83 Å)
主引用文献CryoEM structure of Apo Cryptococcus neoformans H99 Acetyl-CoA Synthetase
To Be Published
9C8S
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CryoEM structure of Cryptococcus neoformans H99 Acetyl-CoA Synthetase in complex with adenosine-5'-ethylphosphate
分子名称: 5'-O-[(S)-ethoxy(hydroxy)phosphoryl]adenosine, Acetyl-coenzyme A synthetase
著者Xu, Z, Schnicker, N.J, Jezeski, A.J, Krysan, D.J.
登録日2024-06-12
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (2.37 Å)
主引用文献CryoEM structure of Cryptococcus neoformans H99 Acetyl-CoA Synthetase in complex with adenosine-5'-ethylphosphate
To Be Published
9EN2
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Crystal structure of the metalloproteinase enhancer PCPE-1 complexed with nanobodies VHH-H4 and VHH-I5
分子名称: CALCIUM ION, GLYCEROL, Procollagen C-endopeptidase enhancer 1, ...
著者Lagoutte, P, Gueguen-Chaignon, V, Bourhis, J.-M, Vadon-Le Goff, S.
登録日2024-03-12
公開日2024-07-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Mono- and bi-specific nanobodies targeting the CUB domains of PCPE-1 reduce the proteolytic processing of fibrillar procollagens.
J.Mol.Biol., 2024

222036

件を2024-07-03に公開中

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