Legacy flatfile-incompatible PDB entries

7QQ0	X-ray structure of the adduct obtained upon reaction of [cis-Rh2(OCOCH3)2(OCOCF3)2] with RNase A (2) Descriptor: (mi2-acetato-O, O')-hexaaquo-dirhodium (II), RHODIUM(II) ION, ... Authors: Loreto, D, Merlino, A. Deposit date: 2022-01-05 Release date: 2022-12-14 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.32 Å) Cite: Reactivity of a fluorine-containing dirhodium tetracarboxylate compound with proteins. Dalton Trans, 51, 2022
7QQ8	Structure of E.coli Class 2 L-asparaginase EcAIII, mutant RDM1-8 (G206Y, R207Q, D210P, S211T) Descriptor: Beta-aspartyl-peptidase, CHLORIDE ION, SODIUM ION Authors: Loch, J.I, Kadziolka, K, Jaskolski, M. Deposit date: 2022-01-06 Release date: 2022-07-13 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structural and biophysical studies of new L-asparaginase variants: lessons from random mutagenesis of the prototypic Escherichia coli Ntn-amidohydrolase. Acta Crystallogr D Struct Biol, 78, 2022
7QQB	Crystal structure of the envelope glycoprotein complex of Puumala virus in complex with the scFv fragment of the broadly neutralizing human antibody ADI-42898 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope polyprotein, GLYCEROL, ... Authors: Serris, A, Rey, F.A, Guardado-Calvo, P. Deposit date: 2022-01-07 Release date: 2023-06-21 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Structural and mechanistic basis of neutralization by a pan-hantavirus protective antibody. Sci Transl Med, 15, 2023
7QRH	Crystal structure of the 5-(aminomethyl)furan-3-yl methyl phosphate kinase MfnE from Methanococcus vannielii. Descriptor: Aspartate/glutamate/uridylate kinase, SULFATE ION Authors: Maddock, R.M.A, Race, P.R, Burton, N.M. Deposit date: 2022-01-11 Release date: 2023-01-18 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (2.36 Å) Cite: Crystal structure of the 5-(aminomethyl)furan-3-yl methyl phosphate kinase MfnE from Methanococcus vannielii. To Be Published
7QRK	Human Carbonic Anhydrase II in complex with N-(2-aminophenyl)-4-((2-oxo-2-((4-sulfamoylphenethyl)amino)ethyl)amino)benzamide Descriptor: Carbonic anhydrase 2, GLYCEROL, N-(2-aminophenyl)-4-((2-oxo-2-((4-sulfamoylphenethyl)amino)ethyl)amino)benzamide, ... Authors: Angeli, A, Ferraroni, M. Deposit date: 2022-01-11 Release date: 2023-01-25 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.428 Å) Cite: Human Carbonic Anhydrase II in complex with N-(2-aminophenyl)-4-((2-oxo-2-((4-sulfamoylphenethyl)amino)ethyl)amino)benzamide To Be Published
7QSE	human Carbonic Anhydrase II in complex with N-(2-aminophenyl)-4-((2-oxo-2-((4-sulfamoylbenzyl)amino)ethyl)amino)benzamide Descriptor: Carbonic anhydrase 2, GLYCEROL, ZINC ION, ... Authors: Angeli, A, Ferraroni, M. Deposit date: 2022-01-13 Release date: 2023-01-25 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.428 Å) Cite: human Carbonic Anhydrase II in complex with N-(2-aminophenyl)-4-((2-oxo-2-((4-sulfamoylbenzyl)amino)ethyl)amino)benzamide To Be Published
7QSF	Structure of E.coli Class 2 L-asparaginase EcAIII, mutant RDM1-12 (G206C, R207T, D210A, S211A) Descriptor: CHLORIDE ION, Isoaspartyl peptidase, Isoaspartyl peptidase subunit beta, ... Authors: Loch, J.I, Kadziolka, K, Jaskolski, M. Deposit date: 2022-01-13 Release date: 2022-07-13 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structural and biophysical studies of new L-asparaginase variants: lessons from random mutagenesis of the prototypic Escherichia coli Ntn-amidohydrolase. Acta Crystallogr D Struct Biol, 78, 2022
7QSI	human Carbonic Anhydrase II in complex with indoline-1-sulfonamide Descriptor: 2,3-dihydroindole-1-sulfonamide, Carbonic anhydrase 2, GLYCEROL, ... Authors: Angeli, A, Ferraroni, M. Deposit date: 2022-01-13 Release date: 2023-01-25 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.304 Å) Cite: Diversely substituted sulfamides for fragment-based drug discovery of carbonic anhydrase inhibitors: synthesis and inhibitory profile. J Enzyme Inhib Med Chem, 37, 2022
7QSR	CryoEM structure of the Ectodomain of Human PLA2R Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Secretory phospholipase A2 receptor, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Briggs, D.C, Lockhart-Cairns, M.P, Baldock, C. Deposit date: 2022-01-14 Release date: 2022-07-20 Last modified: 2022-08-03 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Structure of PLA2R reveals presentation of the dominant membranous nephropathy epitope and an immunogenic patch. Proc.Natl.Acad.Sci.USA, 119, 2022
7QTC	Structure of E.coli Class 2 L-asparaginase EcAIII, mutant RDM1-3 (G206H, R207T, D210P, S211Q) Descriptor: Isoaspartyl peptidase, Isoaspartyl peptidase subunit beta, SODIUM ION Authors: Loch, J.I, Kadziolka, K, Jaskolski, M. Deposit date: 2022-01-14 Release date: 2022-07-13 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Structural and biophysical studies of new L-asparaginase variants: lessons from random mutagenesis of the prototypic Escherichia coli Ntn-amidohydrolase. Acta Crystallogr D Struct Biol, 78, 2022
7QU7	ATAD2 in complex with FragLite16 Descriptor: 1,2-ETHANEDIOL, 4-bromanyl-1,8-naphthyridine, ATPase family AAA domain-containing protein 2, ... Authors: Turberville, S, Martin, M.P, Hope, I, Noble, M.E.M. Deposit date: 2022-01-17 Release date: 2022-11-23 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.13 Å) Cite: Mapping Ligand Interactions of Bromodomains BRD4 and ATAD2 with FragLites and PepLites─Halogenated Probes of Druglike and Peptide-like Molecular Interactions. J.Med.Chem., 65, 2022
7QUB	EV-A71-3Cpro in complex with inhibitor MG78 Descriptor: (1R,2S,5S)-N-{(2S,3R)-4-amino-3-hydroxy-4-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}-3-[N-(tert-butylcarbamoyl)-3-methyl-L-valyl]-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide, Protease 3C, SODIUM ION Authors: El Kilani, H, Hilgenfeld, R. Deposit date: 2022-01-17 Release date: 2022-04-27 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.07 Å) Cite: From Repurposing to Redesign: Optimization of Boceprevir to Highly Potent Inhibitors of the SARS-CoV-2 Main Protease. Molecules, 27, 2022
7QUK	ATAD2 in complex with FragLite1 Descriptor: 1,2-ETHANEDIOL, 4-bromo-1H-pyrazole, ATPase family AAA domain-containing protein 2, ... Authors: Turberville, S, Martin, M.P, Hope, I, Noble, M.E.M. Deposit date: 2022-01-18 Release date: 2022-11-23 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.47 Å) Cite: Mapping Ligand Interactions of Bromodomains BRD4 and ATAD2 with FragLites and PepLites─Halogenated Probes of Druglike and Peptide-like Molecular Interactions. J.Med.Chem., 65, 2022
7QUM	ATAD2 in complex with FragLite2 Descriptor: 1,2-ETHANEDIOL, 4-IODOPYRAZOLE, ATPase family AAA domain-containing protein 2, ... Authors: Turberville, S, Martin, M.P, Hope, I, Noble, M.E.M. Deposit date: 2022-01-18 Release date: 2023-03-01 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Mapping Ligand Interactions of Bromodomains BRD4 and ATAD2 with FragLites and PepLites─Halogenated Probes of Druglike and Peptide-like Molecular Interactions. J.Med.Chem., 65, 2022
7QUP	D. melanogaster 13-protofilament microtubule Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... Authors: Wagstaff, J, Planelles-Herrero, V.J, Derivery, E, Lowe, J. Deposit date: 2022-01-18 Release date: 2022-11-02 Last modified: 2023-10-04 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Diverse cytomotive actins and tubulins share a polymerization switch mechanism conferring robust dynamics. Sci Adv, 9, 2023
7QUW	CVB3-3Cpro in complex with inhibitor MG-78 Descriptor: (1R,2S,5S)-N-{(2S,3R)-4-amino-3-hydroxy-4-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}-3-[N-(tert-butylcarbamoyl)-3-methyl-L-valyl]-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide, Protease 3C Authors: Zhang, L, Hilgenfeld, R. Deposit date: 2022-01-19 Release date: 2022-03-09 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.65 Å) Cite: From Repurposing to Redesign: Optimization of Boceprevir to Highly Potent Inhibitors of the SARS-CoV-2 Main Protease. Molecules, 27, 2022
7QUZ	Crystal structure of the SeMet octameric C-terminal Big_2-CBM56 domains from Paenibacillus illinoisensis (Bacillus circulans IAM1165) beta-1,3-glucanase H Descriptor: Beta-1,3-glucanase bglH, CHLORIDE ION, GLYCEROL Authors: Najmudin, S, Venditto, I, Fontes, C.M.G.A, Bule, P. Deposit date: 2022-01-19 Release date: 2023-02-01 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.156 Å) Cite: Structural and biochemical characterization of C-terminal Big_2-CBM56 domains of Bacillus circulans IAM1165 beta-1,3-glucanase H and Paenibacillus sp CBM56 To be published
7QV1	Bacillus subtilis collided disome (Leading 70S) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Filbeck, S, Pfeffer, S. Deposit date: 2022-01-19 Release date: 2022-03-09 Last modified: 2022-03-30 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Bacterial ribosome collision sensing by a MutS DNA repair ATPase paralogue. Nature, 603, 2022
7QV2	Bacillus subtilis collided disome (Collided 70S) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Filbeck, S, Pfeffer, S. Deposit date: 2022-01-19 Release date: 2022-03-09 Last modified: 2022-04-06 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Bacterial ribosome collision sensing by a MutS DNA repair ATPase paralogue. Nature, 603, 2022
7QV3	Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Filbeck, S, Pfeffer, S. Deposit date: 2022-01-19 Release date: 2022-03-09 Last modified: 2022-03-30 Method: ELECTRON MICROSCOPY (5.14 Å) Cite: Bacterial ribosome collision sensing by a MutS DNA repair ATPase paralogue. Nature, 603, 2022
7QVD	X-ray structure of the lytic transglycosylase SltB2 from Pseudomonas aeruginosa Descriptor: CALCIUM ION, Lytic murein transglycosylase Authors: Batuecas, M.T, Miguel-Ruano, V, Hermoso, J.A. Deposit date: 2022-01-21 Release date: 2023-08-16 Method: X-RAY DIFFRACTION (1.7 Å) Cite: X-ray structure of SltB2 from Pseudomonas aeruginosa To Be Published
7QVK	NM-02 in complex with HER2-ECD Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, NM-02, Receptor tyrosine-protein kinase erbB-2, ... Authors: Cowan, R, Hall, G, Carr, M. Deposit date: 2022-01-21 Release date: 2023-02-01 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Co-crystallisation and humanisation of an anti-HER2 single-domain antibody as a theranostic tool. Plos One, 18, 2023
7QVP	Human collided disome (di-ribosome) stalled on XBP1 mRNA Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... Authors: Denk, T.G, Tesina, P, Beckmann, R. Deposit date: 2022-01-22 Release date: 2022-10-12 Last modified: 2022-11-23 Method: ELECTRON MICROSCOPY (3 Å) Cite: A distinct mammalian disome collision interface harbors K63-linked polyubiquitination of uS10 to trigger hRQT-mediated subunit dissociation. Nat Commun, 13, 2022
7QVR	Structure of E.coli Class 2 L-asparaginase EcAIII, mutant RDM1-37 (G206S, R207T, D210S) Descriptor: Beta-aspartyl-peptidase, CHLORIDE ION, Isoaspartyl peptidase, ... Authors: Loch, J.I, Kadziolka, K, Jaskolski, M. Deposit date: 2022-01-23 Release date: 2022-07-13 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structural and biophysical studies of new L-asparaginase variants: lessons from random mutagenesis of the prototypic Escherichia coli Ntn-amidohydrolase. Acta Crystallogr D Struct Biol, 78, 2022
7QVW	R396W mutant of the vanadium-dependent bromoperoxidase from Corallina pilulifera Descriptor: CALCIUM ION, GLYCEROL, PHOSPHATE ION, ... Authors: Isupov, M.N, Mitchell, D, Littelchild, J.A, Garcia-Rodriguez, E. Deposit date: 2022-01-23 Release date: 2023-02-01 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.922 Å) Cite: R396W mutant of the vanadium-dependent bromoperoxidase from Corallina pilulifera To Be Published

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