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Legacy flatfile-incompatible PDB entries
7ANE
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BU of 7ane by Molmil
Leishmania Major mitochondrial ribosome
Descriptor: 30S Ribosomal protein S17-like protein, 50S ribosomal protein L13-like protein, AKAP7_NLS domain-containing protein, ...
Authors:Soufari, H, Waltz, F, Parrot, C, Bochler, A, Hashem, Y.
Deposit date:2020-10-11
Release date:2021-06-23
Last modified:2025-04-09
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure of the mature kinetoplastids mitoribosome and insights into its large subunit biogenesis.
Proc.Natl.Acad.Sci.USA, 117, 2020
7ANM
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BU of 7anm by Molmil
Nudaurelia capensis omega virus capsid: virus-like particles expressed in Nicotiana benthamiana
Descriptor: p70
Authors:Castells-Graells, R, Ribeiro, J.R.S, Domitrovic, T, Hesketh, E.L, Scarff, C.A, Johnson, J.E, Ranson, N.A, Lawson, D.M, Lomonossoff, G.P.
Deposit date:2020-10-12
Release date:2021-08-25
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.72 Å)
Cite:Plant-expressed virus-like particles reveal the intricate maturation process of a eukaryotic virus.
Commun Biol, 4, 2021
7ANU
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BU of 7anu by Molmil
Crystal structure of Pyrococcus abyssi Pbp11
Descriptor: GLYCEROL, IMIDAZOLE, NICKEL (II) ION, ...
Authors:Hogrel, G, Girard, E, Franzetti, B.
Deposit date:2020-10-12
Release date:2021-11-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Characterization of a small tRNA-binding protein that interacts with the archaeal proteasome complex.
Mol.Microbiol., 118, 2022
7AOI
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BU of 7aoi by Molmil
Trypanosoma brucei mitochondrial ribosome large subunit assembly intermediate
Descriptor: 50S ribosomal protein L13, 50S ribosomal protein L14, 50S ribosomal protein L17, ...
Authors:Tobiasson, V, Gahura, O, Aibara, S, Baradaran, R, Zikova, A, Amunts, A.
Deposit date:2020-10-14
Release date:2020-12-02
Last modified:2025-04-09
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Interconnected assembly factors regulate the biogenesis of mitoribosomal large subunit.
Embo J., 40, 2021
7AOR
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BU of 7aor by Molmil
mt-SSU from Trypanosoma cruzi in complex with mt-IF-3.
Descriptor: 30S Ribosomal protein S17-like protein, AKAP7_NLS domain-containing protein, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Soufari, H, Waltz, F, Parrot, C, Bochler, A, Hashem, Y.
Deposit date:2020-10-15
Release date:2021-04-28
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of the mature kinetoplastids mitoribosome and insights into its large subunit biogenesis.
Proc.Natl.Acad.Sci.USA, 117, 2020
7AP5
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BU of 7ap5 by Molmil
Crystal structure of phycoerythrin from cyanobacterium Nostoc sp. WR13 contains multiple stacks of hexameric assemblies which resemble the rods of phycobilisome.
Descriptor: 1,2-ETHANEDIOL, 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, ...
Authors:Patel, H.M, Roszak, A.W, Cogdell, R.J, Madamwar, D, Liu, H, Gross, M.L, Blankenship, R.E.
Deposit date:2020-10-15
Release date:2021-11-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.131 Å)
Cite:The crystal stacks of hexameric assemblies of phycoerythrin from cyanobacterium Nostoc sp. WR13 resemble rods of phycobilisome
To Be Published
7APH
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BU of 7aph by Molmil
Structure of SARS-CoV-2 Main Protease bound to Tofogliflozin.
Descriptor: 3C-like proteinase, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Guenther, S, Reinke, P, Oberthuer, D, Yefanov, O, Gelisio, L, Ginn, H, Lieske, J, Domaracky, M, Brehm, W, Rahmani Mashour, A, White, T.A, Knoska, J, Pena Esperanza, G, Koua, F, Tolstikova, A, Groessler, M, Fischer, P, Hennicke, V, Fleckenstein, H, Trost, F, Galchenkova, M, Gevorkov, Y, Li, C, Awel, S, Paulraj, L.X, Ullah, N, Falke, S, Alves Franca, B, Schwinzer, M, Brognaro, H, Werner, N, Perbandt, M, Tidow, H, Seychell, B, Beck, T, Meier, S, Doyle, J.J, Giseler, H, Melo, D, Dunkel, I, Lane, T.J, Peck, A, Saouane, S, Hakanpaeae, J, Meyer, J, Noei, H, Gribbon, P, Ellinger, B, Kuzikov, M, Wolf, M, Zhang, L, Ehrt, C, Pletzer-Zelgert, J, Wollenhaupt, J, Feiler, C, Weiss, M, Schulz, E.C, Mehrabi, P, Norton-Baker, B, Schmidt, C, Lorenzen, K, Schubert, R, Han, H, Chari, A, Fernandez Garcia, Y, Turk, D, Hilgenfeld, R, Rarey, M, Zaliani, A, Chapman, H.N, Pearson, A, Betzel, C, Meents, A.
Deposit date:2020-10-16
Release date:2020-12-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:X-ray screening identifies active site and allosteric inhibitors of SARS-CoV-2 main protease.
Science, 372, 2021
7AR4
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BU of 7ar4 by Molmil
Crystal structure of beta-catenin in complex with cyclic peptide inhibitor
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, Cadherin-1, ...
Authors:Wendt, M, Pearce, N.M, Grossmann, T.N, Hennig, S.
Deposit date:2020-10-23
Release date:2021-04-07
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Bicyclic beta-Sheet Mimetics that Target the Transcriptional Coactivator beta-Catenin and Inhibit Wnt Signaling.
Angew.Chem.Int.Ed.Engl., 60, 2021
7ARE
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BU of 7are by Molmil
DNA origami pointer object v2
Descriptor: SCAFFOLD STRAND, STAPLE STRAND
Authors:Thomas, M, Feigl, E, Kohler, F, Kube, M, Nagel-Yuksel, B, Willner, E.M, Funke, J.J, Gerling, T, Stommer, P, Honemann, M.N, Martin, T.G, Scheres, S.H.W, Dietz, H.
Deposit date:2020-10-24
Release date:2020-11-18
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (7.4 Å)
Cite:Revealing the structures of megadalton-scale DNA complexes with nucleotide resolution.
Nat Commun, 11, 2020
7ARQ
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BU of 7arq by Molmil
Cryo EM of 3D DNA origami 16 helix bundle
Descriptor: SCAFFOLD STRAND, STAPLE STRAND
Authors:Feigl, E, Kube, M, Kohler, F.
Deposit date:2020-10-26
Release date:2020-11-18
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (10 Å)
Cite:Revealing the structures of megadalton-scale DNA complexes with nucleotide resolution.
Nat Commun, 11, 2020
7ART
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BU of 7art by Molmil
48 helix bundle DNA origami brick
Descriptor: SCAFFOLD STRAND, STAPLE STRAND
Authors:Feigl, E, Kube, M, Kohler, F, Nagel-Yuksel, B, Willner, E.M, Funke, J.J, Gerling, T, Stommer, P, Honemann, M.N, Martin, T.G, Scheres, S.H.W, Dietz, H.
Deposit date:2020-10-26
Release date:2020-11-11
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (10 Å)
Cite:Revealing the structures of megadalton-scale DNA complexes with nucleotide resolution.
Nat Commun, 11, 2020
7ARV
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BU of 7arv by Molmil
TwistTower_native-twist
Descriptor: SCAFFOLD STRAND, STAPLE STRAND
Authors:Kube, M, Kohler, F, Feigl, E, Nagel-Yuksel, B, Willner, E.M, Funke, J.J, Gerling, T, Stommer, P, Honemann, M.N, Martin, T.G, Scheres, S.H.W, Dietz, H.
Deposit date:2020-10-26
Release date:2020-11-18
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (7.4 Å)
Cite:Revealing the structures of megadalton-scale DNA complexes with nucleotide resolution.
Nat Commun, 11, 2020
7ARY
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BU of 7ary by Molmil
Twist-Tower_twist-corrected-variant
Descriptor: SCAFFOLD STRAND, STAPLE STRAND
Authors:Kube, M, Kohler, F, Feigl, E, Nagel-Yuksel, B, Willner, E.M, Funke, J.J, Gerling, T, Stommer, P, Honemann, M.N, Martin, T.G, Scheres, S.H.W, Dietz, H.
Deposit date:2020-10-26
Release date:2020-11-18
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (8.5 Å)
Cite:Revealing the structures of megadalton-scale DNA complexes with nucleotide resolution.
Nat Commun, 11, 2020
7AS4
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BU of 7as4 by Molmil
Recombinant human gTuRC
Descriptor: Actin, cytoplasmic 1, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Serna, M, Fernandez-Leiro, R, Llorca, O.
Deposit date:2020-10-26
Release date:2021-01-20
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (4.13 Å)
Cite:Assembly of the asymmetric human gamma-tubulin ring complex by RUVBL1-RUVBL2 AAA ATPase.
Sci Adv, 6, 2020
7AS5
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BU of 7as5 by Molmil
126 helix bundle DNA nanostructure
Descriptor: SCAFFOLD STRAND, STAPLE STRAND
Authors:Kube, M, Kohler, F, Feigl, E, Nagel-Yuksel, B, Willner, E.M, Funke, J.J, Gerling, T, Stommer, P, Honemann, M.N, Martin, T.G, Scheres, S.H.W, Dietz, H.
Deposit date:2020-10-27
Release date:2020-11-18
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (9.8 Å)
Cite:Revealing the structures of megadalton-scale DNA complexes with nucleotide resolution.
Nat Commun, 11, 2020
7ASD
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BU of 7asd by Molmil
Structure of native royal jelly filaments
Descriptor: (3beta,14beta,17alpha)-ergosta-5,24(28)-dien-3-ol, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Mattei, S, Ban, A, Picenoni, A, Leibundgut, M, Glockshuber, R, Boehringer, D.
Deposit date:2020-10-27
Release date:2020-12-30
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of native glycolipoprotein filaments in honeybee royal jelly.
Nat Commun, 11, 2020
7ASE
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BU of 7ase by Molmil
43S preinitiation complex from Trypanosoma cruzi with the kDDX60 helicase
Descriptor: 18S, 40S ribosomal protein S10, putative, ...
Authors:Bochler, A, Brito Querido, J, Prilepskaja, T, Soufari, H, Del Cistia, M.L, Kuhn, L, Rimoldi Ribeiro, A, Valasek, L.S, Hashem, Y.
Deposit date:2020-10-27
Release date:2021-04-14
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.33 Å)
Cite:Structural Differences in Translation Initiation between Pathogenic Trypanosomatids and Their Mammalian Hosts.
Cell Rep, 33, 2020
7ASO
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BU of 7aso by Molmil
Staphylococcus aureus 70S after 30 minutes incubation at 37C
Descriptor: 16S, 23S, 30S ribosomal protein S10, ...
Authors:Cimicata, G, Bashan, A, Yonath, A.
Deposit date:2020-10-27
Release date:2021-11-17
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:Staphylococcus aureus 70S after 30 minutes incubation a 37C
To Be Published
7ASP
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BU of 7asp by Molmil
Staphylococcus aureus 70S after 50 minutes incubation at 37C
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Cimicata, G, Bashan, A, Yonath, A.
Deposit date:2020-10-27
Release date:2021-11-17
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Staphylococcus aureus 50S after 30 minutes incubation a 37C
To Be Published
7ATA
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BU of 7ata by Molmil
Nudaurelia capensis omega virus procapsid: virus-like particles expressed in Nicotiana benthamiana
Descriptor: p70
Authors:Castells-Graells, R, Ribeiro, J.R.S, Domitrovic, T, Hesketh, E.L, Scarff, C.A, Johnson, J.E, Ranson, N.A, Lawson, D.M, Lomonossoff, G.P.
Deposit date:2020-10-29
Release date:2021-08-25
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (6.63 Å)
Cite:Plant-expressed virus-like particles reveal the intricate maturation process of a eukaryotic virus.
Commun Biol, 4, 2021
7ATH
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BU of 7ath by Molmil
Crystal structure of UipA
Descriptor: UipA, ZINC ION
Authors:Bremond, N, Gallois, N, Legrand, P, Chapon, V, Arnoux, P.
Deposit date:2020-10-30
Release date:2021-10-06
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.343 Å)
Cite:Discovery and characterization of UipA, a uranium- and iron-binding PepSY protein involved in uranium tolerance by soil bacteria.
Isme J, 16, 2022
7ATK
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BU of 7atk by Molmil
Crystal structure of UipA in complex with Uranium
Descriptor: URANIUM ATOM, UipA, ZINC ION
Authors:Bremond, N, Gallois, N, Legrand, P, Chapon, V, Arnoux, P.
Deposit date:2020-10-30
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.855 Å)
Cite:Discovery and characterization of UipA, a uranium- and iron-binding PepSY protein involved in uranium tolerance by soil bacteria.
Isme J, 16, 2022
7ATL
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BU of 7atl by Molmil
EstCE1, a hydrolase with promiscuous acyltransferase activity
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Esterase, ...
Authors:Palm, G.J, Lammers, M, Berndt, L.
Deposit date:2020-10-30
Release date:2020-11-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.478 Å)
Cite:Discovery and Design of Family VIII Carboxylesterases as Highly Efficient Acyltransferases.
Angew.Chem.Int.Ed.Engl., 60, 2021
7AV4
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BU of 7av4 by Molmil
Dark state structure of the C432S mutant of Fatty Acid Photodecarboxylase (FAP)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Fatty acid photodecarboxylase, chloroplastic, ...
Authors:Schlichting, I, Hartmann, E, Arnoux, P, Sorigue, D, Beisson, F.
Deposit date:2020-11-04
Release date:2021-04-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.936 Å)
Cite:Mechanism and dynamics of fatty acid photodecarboxylase.
Science, 372, 2021
7AV5
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BU of 7av5 by Molmil
Structure of EstD11 in complex with Fluorescein
Descriptor: ACETATE ION, EstD11, FLUORESCIN, ...
Authors:Miguel-Ruano, V, Rivera, I, Hermoso, J.A.
Deposit date:2020-11-04
Release date:2021-03-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Biochemical and Structural Characterization of a novel thermophilic esterase EstD11 provide catalytic insights for the HSL family.
Comput Struct Biotechnol J, 19, 2021

238268

数据于2025-07-02公开中

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