Legacy flatfile-incompatible PDB entries

7U0Q	SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-02 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ... Authors: Patel, A, Ortlund, E. Deposit date: 2022-02-18 Release date: 2023-03-01 Last modified: 2023-09-13 Method: ELECTRON MICROSCOPY (3.86 Å) Cite: Molecular basis of SARS-CoV-2 Omicron variant evasion from shared neutralizing antibody response. Structure, 31, 2023
7U1I	Crystal structure of Pisum sativum vicilin Descriptor: Vicilin Authors: Beavington, B.A.G, Bakestani, I.D, Robinson, K.A, Loewen, M.C. Deposit date: 2022-02-21 Release date: 2022-03-16 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Pea and lentil 7S globulin crystal structures with comparative immunoglobulin epitope mapping. Food Chem (Oxf), 5, 2022
7U1J	Crystal structure of Pisum sativum convicilin Descriptor: Convicilin Authors: Bakestani, I.D, Robinson, K.A, Loewen, M.C. Deposit date: 2022-02-21 Release date: 2022-03-30 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.701 Å) Cite: Pea and lentil 7S globulin crystal structures with comparative immunoglobulin epitope mapping. Food Chem (Oxf), 5, 2022
7U2H	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, and deacylated E-site tRNAgly at 2.55A resolution Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... Authors: Syroegin, E.A, Aleksandrova, E.V, Polikanov, Y.S. Deposit date: 2022-02-24 Release date: 2022-07-13 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Structural basis for the inability of chloramphenicol to inhibit peptide bond formation in the presence of A-site glycine. Nucleic Acids Res., 50, 2022
7U2I	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... Authors: Syroegin, E.A, Aleksandrova, E.V, Polikanov, Y.S. Deposit date: 2022-02-24 Release date: 2022-07-13 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Structural basis for the inability of chloramphenicol to inhibit peptide bond formation in the presence of A-site glycine. Nucleic Acids Res., 50, 2022
7U2J	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... Authors: Syroegin, E.A, Aleksandrova, E.V, Polikanov, Y.S. Deposit date: 2022-02-24 Release date: 2022-07-13 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Structural basis for the inability of chloramphenicol to inhibit peptide bond formation in the presence of A-site glycine. Nucleic Acids Res., 50, 2022
7U3Q	[4T7] Self-assembling tensegrity triangle with four turns of DNA per axis with R3 symmetry Descriptor: DNA (29-MER), DNA (42-MER), DNA (5'-D(P*AP*CP*A)-3'), ... Authors: Woloszyn, K, Vecchioni, S, Lu, B, Ma, Y, Seeman, N.C, Sha, R, Ohayon, Y.P, Huang, Q. Deposit date: 2022-02-28 Release date: 2022-09-28 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (9.32 Å) Cite: Augmented DNA Nanoarchitectures: A Structural Library of 3D Self-Assembling Tensegrity Triangle Variants. Adv Mater, 34, 2022
7U3V	[F224] Self-assembling tensegrity triangle with two turns, two turns and four turns of DNA per axis by extension with P1 symmetry Descriptor: DNA (35-MER), DNA (42-MER), DNA (5'-D(*CP*AP*CP*GP*AP*GP*CP*CP*TP*GP*AP*TP*CP*GP*GP*AP*CP*AP*AP*GP*A)-3'), ... Authors: Woloszyn, K, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P. Deposit date: 2022-02-28 Release date: 2022-09-28 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (5.14 Å) Cite: Augmented DNA Nanoarchitectures: A Structural Library of 3D Self-Assembling Tensegrity Triangle Variants. Adv Mater, 34, 2022
7U3W	[L224] Self-assembling tensegrity triangle with two turns, two turns and four turns of DNA per axis by linker addition with P1 symmetry Descriptor: DNA (5'-D(*AP*AP*CP*CP*TP*AP*CP*CP*TP*GP*GP*CP*AP*GP*GP*AP*CP*GP*AP*CP*T)-3'), DNA (5'-D(*AP*GP*AP*GP*TP*CP*GP*TP*GP*GP*CP*TP*CP*G)-3'), DNA (5'-D(*CP*AP*CP*GP*AP*GP*CP*CP*TP*GP*AP*TP*CP*GP*GP*AP*CP*AP*AP*GP*A)-3'), ... Authors: Woloszyn, K, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P. Deposit date: 2022-02-28 Release date: 2022-09-28 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (6.33 Å) Cite: Augmented DNA Nanoarchitectures: A Structural Library of 3D Self-Assembling Tensegrity Triangle Variants. Adv Mater, 34, 2022
7U3Z	[F244] Self-assembling tensegrity triangle with two turns, four turns and four turns of DNA per axis by extension with P1 symmetry Descriptor: DNA (35-MER), DNA (42-MER), DNA (5'-D(*AP*AP*CP*CP*TP*AP*CP*CP*TP*GP*GP*CP*AP*GP*GP*AP*CP*GP*AP*CP*T)-3'), ... Authors: Woloszyn, K, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P. Deposit date: 2022-02-28 Release date: 2022-09-28 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (7.55 Å) Cite: Augmented DNA Nanoarchitectures: A Structural Library of 3D Self-Assembling Tensegrity Triangle Variants. Adv Mater, 34, 2022
7U40	[L244] Self-assembling tensegrity triangle with two turns, four turns and four turns of DNA per axis by linker addition with P1 symmetry Descriptor: DNA (5'-D(*AP*AP*CP*CP*TP*AP*CP*CP*TP*GP*GP*CP*AP*GP*GP*AP*CP*GP*AP*CP*T)-3'), DNA (5'-D(*TP*TP*AP*GP*TP*CP*GP*TP*GP*GP*CP*TP*CP*G)-3'), DNA (5'-D(P*AP*CP*TP*GP*AP*TP*GP*TP*GP*GP*TP*AP*GP*G)-3'), ... Authors: Woloszyn, K, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P. Deposit date: 2022-02-28 Release date: 2022-09-28 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (7.55 Å) Cite: Augmented DNA Nanoarchitectures: A Structural Library of 3D Self-Assembling Tensegrity Triangle Variants. Adv Mater, 34, 2022
7U41	[F234] Self-assembling tensegrity triangle with two turns, three turns and four turns of DNA per axis by extension with P1 symmetry Descriptor: DNA (31-MER), DNA (35-MER), DNA (42-MER), ... Authors: Woloszyn, K, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P. Deposit date: 2022-02-28 Release date: 2022-09-28 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (7.24 Å) Cite: Augmented DNA Nanoarchitectures: A Structural Library of 3D Self-Assembling Tensegrity Triangle Variants. Adv Mater, 34, 2022
7U42	[F334] Self-assembling tensegrity triangle with three turns, three turns and four turns of DNA per axis by extension with P1 symmetry Descriptor: DNA (31-MER), DNA (35-MER), DNA (42-MER), ... Authors: Woloszyn, K, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P. Deposit date: 2022-02-28 Release date: 2022-09-28 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (7.71 Å) Cite: Augmented DNA Nanoarchitectures: A Structural Library of 3D Self-Assembling Tensegrity Triangle Variants. Adv Mater, 34, 2022
7U43	[L334] Self-assembling tensegrity triangle with three turns, three turns and four turns of DNA per axis by extension and linker addition with P1 symmetry Descriptor: DNA (31-MER), DNA (5'-D(*TP*AP*CP*AP*CP*CP*GP*AP*TP*CP*AP*CP*CP*TP*GP*CP*CP*AP*CP*CP*G)-3'), DNA (5'-D(P*AP*CP*TP*GP*AP*TP*GP*TP*GP*GP*TP*AP*GP*G)-3'), ... Authors: Woloszyn, K, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P. Deposit date: 2022-02-28 Release date: 2022-09-28 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (7.55 Å) Cite: Augmented DNA Nanoarchitectures: A Structural Library of 3D Self-Assembling Tensegrity Triangle Variants. Adv Mater, 34, 2022
7U44	[F344] Self-assembling tensegrity triangle with three turns, four turns and four turns of DNA per axis by extension with P1 symmetry Descriptor: DNA (31-MER), DNA (35-MER), DNA (42-MER), ... Authors: Woloszyn, K, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P. Deposit date: 2022-02-28 Release date: 2022-09-28 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (8.46 Å) Cite: Augmented DNA Nanoarchitectures: A Structural Library of 3D Self-Assembling Tensegrity Triangle Variants. Adv Mater, 34, 2022
7U45	[L344] Self-assembling tensegrity triangle with three turns, four turns and four turns of DNA per axis by extension and linker addition with P1 symmetry Descriptor: DNA (31-MER), DNA (5'-D(P*AP*CP*TP*GP*AP*TP*GP*TP*GP*GP*TP*AP*GP*G)-3'), DNA (5'-D(P*AP*GP*GP*CP*AP*GP*CP*CP*TP*GP*TP*AP*CP*GP*GP*AP*CP*AP*TP*CP*A)-3'), ... Authors: Woloszyn, K, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P. Deposit date: 2022-02-28 Release date: 2022-09-28 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (8.05 Å) Cite: Augmented DNA Nanoarchitectures: A Structural Library of 3D Self-Assembling Tensegrity Triangle Variants. Adv Mater, 34, 2022
7U4P	Covalently stabilized triangular trimer composed of Abeta17-36 beta-hairpins Descriptor: Amyloid-beta 17-36 peptide Authors: Kreutzer, A.G, Haerianardakani, S, Nowick, J.S. Deposit date: 2022-02-28 Release date: 2023-03-15 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (1.803 Å) Cite: Antibodies Raised Against an A beta Oligomer Mimic Recognize Pathological Features in Alzheimer's Disease and Associated Amyloid-Disease Brain Tissue. Acs Cent.Sci., 10, 2024
7U4T	Human V-ATPase in state 2 with SidK and mEAK-7 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, MTOR-associated protein MEAK7, ... Authors: Wang, L, Fu, T.M. Deposit date: 2022-03-01 Release date: 2022-08-24 Last modified: 2023-09-06 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Identification of mEAK-7 as a human V-ATPase regulator via cryo-EM data mining. Proc.Natl.Acad.Sci.USA, 119, 2022
7U6F	Mouse retromer (VPS26/VPS35/VPS29) heterotrimers Descriptor: 1,2-ETHANEDIOL, GLYCEROL, SULFATE ION, ... Authors: Kendall, A.K, Chandra, M, Jackson, L.P. Deposit date: 2022-03-04 Release date: 2022-10-12 Last modified: 2024-06-12 Method: ELECTRON MICROSCOPY (4.9 Å) Cite: Improved mammalian retromer cryo-EM structures reveal a new assembly interface. J.Biol.Chem., 298, 2022
7U71	Crystal Structure of Mouse Cadherin-23 EC13-15 Descriptor: ACETATE ION, CALCIUM ION, Cadherin-23 Authors: De La Torre, P, Sandhu, J.S, Velez-Cortes, F, Sotomayor, M. Deposit date: 2022-03-07 Release date: 2023-03-15 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.975 Å) Cite: Crystal Structure of Mouse Cadherin-23 EC13-15 To be published
7U8C	Crystal structure of Mesothelin C-terminal peptide-MORAb 15B6 FAB complex Descriptor: MORab 15B6 Fab heavy chain, MORab 15B6 Fab light chain, Mesothelin, ... Authors: Zhan, J, Esser, L, Xia, D. Deposit date: 2022-03-08 Release date: 2022-06-08 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.74 Å) Cite: Highly active CAR T cells that bind to a juxtamembrane region of mesothelin and are not blocked by shed mesothelin. Proc.Natl.Acad.Sci.USA, 119, 2022
7U8O	Structure of porcine V-ATPase with mEAK7 and SidK, Rotary state 2 Descriptor: ATPase H(+)-transporting lysosomal accessory protein 2, ATPase H+ transporting accessory protein 1, Bacterial effector protein SidK, ... Authors: Tan, Y.Z, Keon, K.A. Deposit date: 2022-03-09 Release date: 2022-07-06 Last modified: 2024-02-14 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: CryoEM of endogenous mammalian V-ATPase interacting with the TLDc protein mEAK-7. Life Sci Alliance, 5, 2022
7U8P	Structure of porcine kidney V-ATPase with SidK, Rotary State 1 Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H(+)-transporting lysosomal accessory protein 2, ATPase H+ transporting accessory protein 1, ... Authors: Tan, Y.Z, Keon, K.A. Deposit date: 2022-03-09 Release date: 2022-07-06 Last modified: 2024-02-14 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: CryoEM of endogenous mammalian V-ATPase interacting with the TLDc protein mEAK-7. Life Sci Alliance, 5, 2022
7U8Q	Structure of porcine kidney V-ATPase with SidK, Rotary State 2 Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H(+)-transporting lysosomal accessory protein 2, ATPase H+ transporting accessory protein 1, ... Authors: Tan, Y.Z, Keon, K.A. Deposit date: 2022-03-09 Release date: 2022-07-06 Last modified: 2024-02-14 Method: ELECTRON MICROSCOPY (4.1 Å) Cite: CryoEM of endogenous mammalian V-ATPase interacting with the TLDc protein mEAK-7. Life Sci Alliance, 5, 2022
7U8R	Structure of porcine kidney V-ATPase with SidK, Rotary State 3 Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H(+)-transporting lysosomal accessory protein 2, ATPase H+ transporting accessory protein 1, ... Authors: Tan, Y.Z, Keon, K.A. Deposit date: 2022-03-09 Release date: 2022-07-06 Last modified: 2024-02-14 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: CryoEM of endogenous mammalian V-ATPase interacting with the TLDc protein mEAK-7. Life Sci Alliance, 5, 2022

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