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PDB形式変換不可の PDB エントリー
7BK5
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PfCopC mutant - E27A
分子名称: CHLORIDE ION, COPPER (II) ION, PHOSPHATE ION, ...
著者Muderspach, S.J, Ipsen, J, Rollan, C.H, Bertelsen, A.B, Norholm, M.H.H, Johansen, K.S, Lo Leggio, L.
登録日2021-01-15
公開日2021-07-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Copper binding and reactivity at the histidine brace motif: insights from mutational analysis of the Pseudomonas fluorescens copper chaperone CopC.
Febs Lett., 595, 2021
7BK6
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PfCopC mutant - D83A
分子名称: ACETATE ION, CHLORIDE ION, COPPER (II) ION, ...
著者Muderspach, S.J, Ipsen, J, Rollan, C.H, Bertelsen, A.B, Norholm, M.H.H, Johansen, K.S, Lo Leggio, L.
登録日2021-01-15
公開日2021-07-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Copper binding and reactivity at the histidine brace motif: insights from mutational analysis of the Pseudomonas fluorescens copper chaperone CopC.
Febs Lett., 595, 2021
7BK7
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PfCopC mutant - D83N
分子名称: ACETATE ION, CHLORIDE ION, COPPER (II) ION, ...
著者Muderspach, S.J, Ipsen, J, Rollan, C.H, Bertelsen, A.B, Norholm, M.H.H, Johansen, K.S, Lo Leggio, L.
登録日2021-01-15
公開日2021-07-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Copper binding and reactivity at the histidine brace motif: insights from mutational analysis of the Pseudomonas fluorescens copper chaperone CopC.
Febs Lett., 595, 2021
7BKX
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Diploptera punctata inspired lipocalin-like Milk protein expressed in Saccharomyces cerevisiae
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
著者Banerjee, S, Kanagavijayan, D, Subramanian, R, Santhakumari, P.R, Chavas, L.M.G, Ramaswamy, S.
登録日2021-01-17
公開日2021-12-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structure of recombinantly expressed cockroach Lili-Mip protein in glycosylated and deglycosylated forms.
Biochim Biophys Acta Gen Subj, 1866, 2022
7BL1
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BU of 7bl1 by Molmil
human complex II-BATS bound to membrane-attached Rab5a-GTP
分子名称: Beclin-1, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Tremel, S, Morado, D.R, Kovtun, O, Williams, R.L, Briggs, J.A.G, Munro, S, Ohashi, Y, Bertram, J, Perisic, O.
登録日2021-01-17
公開日2021-03-03
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (9.8 Å)
主引用文献Structural basis for VPS34 kinase activation by Rab1 and Rab5 on membranes.
Nat Commun, 12, 2021
7BL2
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BU of 7bl2 by Molmil
pre-50S-ObgE particle state 1
分子名称: 23S ribosomal RNA, 50S ribosomal protein L11, 50S ribosomal protein L13, ...
著者Hilal, T, Nikolay, R, Schmidt, S, Spahn, C.M.T.
登録日2021-01-18
公開日2021-05-12
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Snapshots of native pre-50S ribosomes reveal a biogenesis factor network and evolutionary specialization.
Mol.Cell, 81, 2021
7BL3
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pre-50S-ObgE particle state 2
分子名称: 23S ribosomal RNA, 50S ribosomal protein L11, 50S ribosomal protein L13, ...
著者Hilal, T, Nikolay, R, Spahn, C.M.T.
登録日2021-01-18
公開日2021-05-12
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Snapshots of native pre-50S ribosomes reveal a biogenesis factor network and evolutionary specialization.
Mol.Cell, 81, 2021
7BLH
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Structure of CBM BT3015C from Bacteroides thetaiotaomicron in complex with O-GalNAc core 1-Thr
分子名称: CALCIUM ION, THREONINE, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-galactopyranose, ...
著者Costa, R.L, Carvalho, A.L.
登録日2021-01-18
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Structural basis for mucin-type O-glycan recognition by proteins of a Bacteroides thetaiotaomicron polysaccharide utilization loci
To Be Published
7BN2
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BU of 7bn2 by Molmil
Clathrin heavy chain N-terminal domain bound to Non structured protein 3 from Eastern Equine Encephalitis Virus
分子名称: Clathrin heavy chain 1, Non structured protein 3 from Eastern Equine Encephalitis Virus, PHOSPHATE ION, ...
著者Badgujar, D.C, Dobritzsch, D.
登録日2021-01-21
公開日2022-03-02
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.965 Å)
主引用文献Large-scale phage-based screening reveals extensive pan-viral mimicry of host short linear motifs
Nat Commun, 14, 2023
7BNM
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BU of 7bnm by Molmil
Closed conformation of D614G SARS-CoV-2 spike protein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Benton, D.J, Wrobel, A.G, Rosenthal, P.B, Gamblin, S.J.
登録日2021-01-22
公開日2021-02-03
最終更新日2021-03-10
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献The effect of the D614G substitution on the structure of the spike glycoprotein of SARS-CoV-2.
Proc.Natl.Acad.Sci.USA, 118, 2021
7BNS
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BU of 7bns by Molmil
VDR complex with BXL-62
分子名称: 1,25-Dihydroxy-16-ene-20-cyclopropyl-vitamin D3, Nuclear receptor coactivator 1, Vitamin D3 receptor A
著者Rochel, N, Belorusova, A.Y.
登録日2021-01-22
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Vitamin D Analogs Bearing C-20 Modifications Stabilize the Agonistic Conformation of Non-Responsive Vitamin D Receptor Variants.
Int J Mol Sci, 23, 2022
7BNU
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BU of 7bnu by Molmil
VDR complex with BXL-62
分子名称: 1,25-Dihydroxy-16-ene-20-cyclopropyl-vitamin D3, Nuclear receptor coactivator 1, Vitamin D3 receptor A
著者Rochel, N, Belorusova, A.Y.
登録日2021-01-22
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Vitamin D Analogs Bearing C-20 Modifications Stabilize the Agonistic Conformation of Non-Responsive Vitamin D Receptor Variants.
Int J Mol Sci, 23, 2022
7BO7
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BU of 7bo7 by Molmil
CRYSTAL STRUCTURE OF THE HUMAN PRMT5:MEP50 COMPLEX with JNJB44355437
分子名称: (2~{R},3~{R},4~{S},5~{R})-2-[(4~{a}~{S},7~{a}~{S})-4-azanyl-1,4,4~{a},7~{a}-tetrahydropyrrolo[2,3-d]pyrimidin-7-yl]-5-(quinolin-7-yloxymethyl)oxolane-3,4-diol, 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Brown, D, Robinson, C, Carr, K.H, Pande, V.
登録日2021-01-24
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献CRYSTAL STRUCTURE OF THE HUMAN PRMT5:MEP50 COMPLEX with JNJB44355437
To Be Published
7BSI
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BU of 7bsi by Molmil
Epstein-Barr virus, one asymmetric unit structure of the icosahedral tegumented capsid
分子名称: Major capsid protein, Small capsomere-interacting protein, Triplex capsid protein 1, ...
著者Li, Z, Yu, X.
登録日2020-03-30
公開日2020-09-30
最終更新日2020-10-14
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献CryoEM structure of the tegumented capsid of Epstein-Barr virus.
Cell Res., 30, 2020
7BT6
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BU of 7bt6 by Molmil
Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.12 Angstroms resolution(state R1)
分子名称: 60S ribosomal protein L11-A, 60S ribosomal protein L13-A, 60S ribosomal protein L14-A, ...
著者Li, Y, Wilson, D.M.
登録日2020-03-31
公開日2020-10-28
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献Structural insights into assembly of the ribosomal nascent polypeptide exit tunnel.
Nat Commun, 11, 2020
7BTB
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BU of 7btb by Molmil
Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.22 Angstroms resolution(state R2)
分子名称: 60S ribosomal protein L11-A, 60S ribosomal protein L13-A, 60S ribosomal protein L14-A, ...
著者Li, Y, Wilson, D.M.
登録日2020-04-01
公開日2020-10-28
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献Structural insights into assembly of the ribosomal nascent polypeptide exit tunnel.
Nat Commun, 11, 2020
7BW6
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BU of 7bw6 by Molmil
Varicella-zoster virus capsid
分子名称: Major capsid protein, Small capsomere-interacting protein, Triplex capsid protein 1, ...
著者Wang, P.Y, Qi, J.X, Liu, C.C, Sun, J.Q.
登録日2020-04-13
公開日2020-09-23
最終更新日2020-10-07
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-EM structure of the varicella-zoster virus A-capsid.
Nat Commun, 11, 2020
7BZW
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BU of 7bzw by Molmil
Structure of Hsp21
分子名称: Heat shock protein 21, chloroplastic
著者Lau, W.C.Y.
登録日2020-04-28
公開日2021-04-28
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Structural basis of substrate recognition and thermal protection by a small heat shock protein.
Nat Commun, 12, 2021
7BZY
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BU of 7bzy by Molmil
Hsp21-DXPS
分子名称: 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic, Heat shock protein 21
著者Lau, W.C.Y.
登録日2020-04-29
公開日2021-07-28
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural basis of substrate recognition and thermal protection by a small heat shock protein.
Nat Commun, 12, 2021
7CBM
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BU of 7cbm by Molmil
Cryo-EM structure of the flagellar distal rod with partial hook from Salmonella
分子名称: Flagellar basal-body rod protein FlgF, Flagellar basal-body rod protein FlgG, Flagellar hook protein FlgE
著者Tan, J.X, Chang, S.H, Wang, X.F, Xu, C.H, Zhou, Y, Zhang, X, Zhu, Y.Q.
登録日2020-06-12
公開日2021-04-28
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural basis of assembly and torque transmission of the bacterial flagellar motor.
Cell, 184, 2021
7CF9
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BU of 7cf9 by Molmil
Structure of RyR1 (Ca2+/CHL)
分子名称: 5-bromanyl-N-[4-chloranyl-2-methyl-6-(methylcarbamoyl)phenyl]-2-(3-chloranylpyridin-2-yl)pyrazole-3-carboxamide, CALCIUM ION, Peptidyl-prolyl cis-trans isomerase FKBP1B, ...
著者Ma, R, Haji-Ghassemi, O, Ma, D, Lin, L, Samurkas, A, Van Petegem, F, Yuchi, Z.
登録日2020-06-24
公開日2020-09-02
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Structural basis for diamide modulation of ryanodine receptor.
Nat.Chem.Biol., 16, 2020
7CGB
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BU of 7cgb by Molmil
Cryo-EM structure of the flagellar hook from Salmonella
分子名称: Flagellar hook protein FlgE
著者Tan, J.X, Chang, S.H, Wang, X.F, Xu, C.H, Zhou, Y, Zhang, X, Zhu, Y.Q.
登録日2020-07-01
公開日2021-04-28
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural basis of assembly and torque transmission of the bacterial flagellar motor.
Cell, 184, 2021
7CGO
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BU of 7cgo by Molmil
Cryo-EM structure of the flagellar motor-hook complex from Salmonella
分子名称: Flagellar L-ring protein, Flagellar M-ring protein, Flagellar MS ring L1, ...
著者Tan, J.X, Chang, S.H, Wang, X.F, Xu, C.H, Zhou, Y, Zhang, X, Zhu, Y.Q.
登録日2020-07-01
公開日2021-04-28
最終更新日2021-05-26
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural basis of assembly and torque transmission of the bacterial flagellar motor.
Cell, 184, 2021
7CKB
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BU of 7ckb by Molmil
Simplified Alpha-Carboxysome, T=3
分子名称: Major carboxysome shell protein 1A, Unidentified carboxysome polypeptide
著者Tan, Y.Q, Ali, S, Xue, B, Robinson, R.C, Narita, A, Yew, W.S.
登録日2020-07-16
公開日2021-08-25
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.24 Å)
主引用文献Structure of a Minimal alpha-Carboxysome-Derived Shell and Its Utility in Enzyme Stabilization.
Biomacromolecules, 22, 2021
7CKC
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Simplified Alpha-Carboxysome, T=4
分子名称: Major carboxysome shell protein 1A, Unidentified carboxysome polypeptide
著者Tan, Y.Q, Ali, S, Xue, B, Robinson, R.C, Narita, A, Yew, W.S.
登録日2020-07-16
公開日2021-08-25
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structure of a Minimal alpha-Carboxysome-Derived Shell and Its Utility in Enzyme Stabilization.
Biomacromolecules, 22, 2021

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