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PDB形式変換不可の PDB エントリー
7ANB
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BU of 7anb by Molmil
A single sulfatase is required for metabolism of colonic mucin O-glycans and intestinal colonization by a symbiotic human gut bacterium (BT1622-S1_20)
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, N-acetylgalactosamine-6-sulfatase, ...
著者Sofia de Jesus Vaz Luis, A, Basle, A, Martens, E.C, Cartmell, A.
登録日2020-10-11
公開日2021-10-27
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A single sulfatase is required to access colonic mucin by a gut bacterium.
Nature, 598, 2021
7ANE
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Leishmania Major mitochondrial ribosome
分子名称: 30S Ribosomal protein S17-like protein, 50S ribosomal protein L13-like protein, AKAP7_NLS domain-containing protein, ...
著者Soufari, H, Waltz, F, Parrot, C, Bochler, A, Hashem, Y.
登録日2020-10-11
公開日2021-06-23
最終更新日2025-04-09
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structure of the mature kinetoplastids mitoribosome and insights into its large subunit biogenesis.
Proc.Natl.Acad.Sci.USA, 117, 2020
7ANM
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Nudaurelia capensis omega virus capsid: virus-like particles expressed in Nicotiana benthamiana
分子名称: p70
著者Castells-Graells, R, Ribeiro, J.R.S, Domitrovic, T, Hesketh, E.L, Scarff, C.A, Johnson, J.E, Ranson, N.A, Lawson, D.M, Lomonossoff, G.P.
登録日2020-10-12
公開日2021-08-25
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.72 Å)
主引用文献Plant-expressed virus-like particles reveal the intricate maturation process of a eukaryotic virus.
Commun Biol, 4, 2021
7ANU
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BU of 7anu by Molmil
Crystal structure of Pyrococcus abyssi Pbp11
分子名称: GLYCEROL, IMIDAZOLE, NICKEL (II) ION, ...
著者Hogrel, G, Girard, E, Franzetti, B.
登録日2020-10-12
公開日2021-11-03
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Characterization of a small tRNA-binding protein that interacts with the archaeal proteasome complex.
Mol.Microbiol., 118, 2022
7AOI
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BU of 7aoi by Molmil
Trypanosoma brucei mitochondrial ribosome large subunit assembly intermediate
分子名称: 50S ribosomal protein L13, 50S ribosomal protein L14, 50S ribosomal protein L17, ...
著者Tobiasson, V, Gahura, O, Aibara, S, Baradaran, R, Zikova, A, Amunts, A.
登録日2020-10-14
公開日2020-12-02
最終更新日2025-04-09
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Interconnected assembly factors regulate the biogenesis of mitoribosomal large subunit.
Embo J., 40, 2021
7AOR
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BU of 7aor by Molmil
mt-SSU from Trypanosoma cruzi in complex with mt-IF-3.
分子名称: 30S Ribosomal protein S17-like protein, AKAP7_NLS domain-containing protein, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Soufari, H, Waltz, F, Parrot, C, Bochler, A, Hashem, Y.
登録日2020-10-15
公開日2021-04-28
最終更新日2024-11-20
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure of the mature kinetoplastids mitoribosome and insights into its large subunit biogenesis.
Proc.Natl.Acad.Sci.USA, 117, 2020
7AP5
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BU of 7ap5 by Molmil
Crystal structure of phycoerythrin from cyanobacterium Nostoc sp. WR13 contains multiple stacks of hexameric assemblies which resemble the rods of phycobilisome.
分子名称: 1,2-ETHANEDIOL, 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, ...
著者Patel, H.M, Roszak, A.W, Cogdell, R.J, Madamwar, D, Liu, H, Gross, M.L, Blankenship, R.E.
登録日2020-10-15
公開日2021-11-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.131 Å)
主引用文献The crystal stacks of hexameric assemblies of phycoerythrin from cyanobacterium Nostoc sp. WR13 resemble rods of phycobilisome
To Be Published
7APH
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BU of 7aph by Molmil
Structure of SARS-CoV-2 Main Protease bound to Tofogliflozin.
分子名称: 3C-like proteinase, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
著者Guenther, S, Reinke, P, Oberthuer, D, Yefanov, O, Gelisio, L, Ginn, H, Lieske, J, Domaracky, M, Brehm, W, Rahmani Mashour, A, White, T.A, Knoska, J, Pena Esperanza, G, Koua, F, Tolstikova, A, Groessler, M, Fischer, P, Hennicke, V, Fleckenstein, H, Trost, F, Galchenkova, M, Gevorkov, Y, Li, C, Awel, S, Paulraj, L.X, Ullah, N, Falke, S, Alves Franca, B, Schwinzer, M, Brognaro, H, Werner, N, Perbandt, M, Tidow, H, Seychell, B, Beck, T, Meier, S, Doyle, J.J, Giseler, H, Melo, D, Dunkel, I, Lane, T.J, Peck, A, Saouane, S, Hakanpaeae, J, Meyer, J, Noei, H, Gribbon, P, Ellinger, B, Kuzikov, M, Wolf, M, Zhang, L, Ehrt, C, Pletzer-Zelgert, J, Wollenhaupt, J, Feiler, C, Weiss, M, Schulz, E.C, Mehrabi, P, Norton-Baker, B, Schmidt, C, Lorenzen, K, Schubert, R, Han, H, Chari, A, Fernandez Garcia, Y, Turk, D, Hilgenfeld, R, Rarey, M, Zaliani, A, Chapman, H.N, Pearson, A, Betzel, C, Meents, A.
登録日2020-10-16
公開日2020-12-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献X-ray screening identifies active site and allosteric inhibitors of SARS-CoV-2 main protease.
Science, 372, 2021
7AR4
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BU of 7ar4 by Molmil
Crystal structure of beta-catenin in complex with cyclic peptide inhibitor
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, Cadherin-1, ...
著者Wendt, M, Pearce, N.M, Grossmann, T.N, Hennig, S.
登録日2020-10-23
公開日2021-04-07
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Bicyclic beta-Sheet Mimetics that Target the Transcriptional Coactivator beta-Catenin and Inhibit Wnt Signaling.
Angew.Chem.Int.Ed.Engl., 60, 2021
7ARE
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BU of 7are by Molmil
DNA origami pointer object v2
分子名称: SCAFFOLD STRAND, STAPLE STRAND
著者Thomas, M, Feigl, E, Kohler, F, Kube, M, Nagel-Yuksel, B, Willner, E.M, Funke, J.J, Gerling, T, Stommer, P, Honemann, M.N, Martin, T.G, Scheres, S.H.W, Dietz, H.
登録日2020-10-24
公開日2020-11-18
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (7.4 Å)
主引用文献Revealing the structures of megadalton-scale DNA complexes with nucleotide resolution.
Nat Commun, 11, 2020
7ARQ
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BU of 7arq by Molmil
Cryo EM of 3D DNA origami 16 helix bundle
分子名称: SCAFFOLD STRAND, STAPLE STRAND
著者Feigl, E, Kube, M, Kohler, F.
登録日2020-10-26
公開日2020-11-18
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (10 Å)
主引用文献Revealing the structures of megadalton-scale DNA complexes with nucleotide resolution.
Nat Commun, 11, 2020
7ART
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BU of 7art by Molmil
48 helix bundle DNA origami brick
分子名称: SCAFFOLD STRAND, STAPLE STRAND
著者Feigl, E, Kube, M, Kohler, F, Nagel-Yuksel, B, Willner, E.M, Funke, J.J, Gerling, T, Stommer, P, Honemann, M.N, Martin, T.G, Scheres, S.H.W, Dietz, H.
登録日2020-10-26
公開日2020-11-11
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (10 Å)
主引用文献Revealing the structures of megadalton-scale DNA complexes with nucleotide resolution.
Nat Commun, 11, 2020
7ARV
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BU of 7arv by Molmil
TwistTower_native-twist
分子名称: SCAFFOLD STRAND, STAPLE STRAND
著者Kube, M, Kohler, F, Feigl, E, Nagel-Yuksel, B, Willner, E.M, Funke, J.J, Gerling, T, Stommer, P, Honemann, M.N, Martin, T.G, Scheres, S.H.W, Dietz, H.
登録日2020-10-26
公開日2020-11-18
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (7.4 Å)
主引用文献Revealing the structures of megadalton-scale DNA complexes with nucleotide resolution.
Nat Commun, 11, 2020
7ARY
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BU of 7ary by Molmil
Twist-Tower_twist-corrected-variant
分子名称: SCAFFOLD STRAND, STAPLE STRAND
著者Kube, M, Kohler, F, Feigl, E, Nagel-Yuksel, B, Willner, E.M, Funke, J.J, Gerling, T, Stommer, P, Honemann, M.N, Martin, T.G, Scheres, S.H.W, Dietz, H.
登録日2020-10-26
公開日2020-11-18
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (8.5 Å)
主引用文献Revealing the structures of megadalton-scale DNA complexes with nucleotide resolution.
Nat Commun, 11, 2020
7AS4
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BU of 7as4 by Molmil
Recombinant human gTuRC
分子名称: Actin, cytoplasmic 1, GUANOSINE-5'-DIPHOSPHATE, ...
著者Serna, M, Fernandez-Leiro, R, Llorca, O.
登録日2020-10-26
公開日2021-01-20
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (4.13 Å)
主引用文献Assembly of the asymmetric human gamma-tubulin ring complex by RUVBL1-RUVBL2 AAA ATPase.
Sci Adv, 6, 2020
7AS5
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BU of 7as5 by Molmil
126 helix bundle DNA nanostructure
分子名称: SCAFFOLD STRAND, STAPLE STRAND
著者Kube, M, Kohler, F, Feigl, E, Nagel-Yuksel, B, Willner, E.M, Funke, J.J, Gerling, T, Stommer, P, Honemann, M.N, Martin, T.G, Scheres, S.H.W, Dietz, H.
登録日2020-10-27
公開日2020-11-18
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (9.8 Å)
主引用文献Revealing the structures of megadalton-scale DNA complexes with nucleotide resolution.
Nat Commun, 11, 2020
7ASD
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BU of 7asd by Molmil
Structure of native royal jelly filaments
分子名称: (3beta,14beta,17alpha)-ergosta-5,24(28)-dien-3-ol, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Mattei, S, Ban, A, Picenoni, A, Leibundgut, M, Glockshuber, R, Boehringer, D.
登録日2020-10-27
公開日2020-12-30
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure of native glycolipoprotein filaments in honeybee royal jelly.
Nat Commun, 11, 2020
7ASE
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BU of 7ase by Molmil
43S preinitiation complex from Trypanosoma cruzi with the kDDX60 helicase
分子名称: 18S, 40S ribosomal protein S10, putative, ...
著者Bochler, A, Brito Querido, J, Prilepskaja, T, Soufari, H, Del Cistia, M.L, Kuhn, L, Rimoldi Ribeiro, A, Valasek, L.S, Hashem, Y.
登録日2020-10-27
公開日2021-04-14
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.33 Å)
主引用文献Structural Differences in Translation Initiation between Pathogenic Trypanosomatids and Their Mammalian Hosts.
Cell Rep, 33, 2020
7ASO
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BU of 7aso by Molmil
Staphylococcus aureus 70S after 30 minutes incubation at 37C
分子名称: 16S, 23S, 30S ribosomal protein S10, ...
著者Cimicata, G, Bashan, A, Yonath, A.
登録日2020-10-27
公開日2021-11-17
最終更新日2025-07-09
実験手法ELECTRON MICROSCOPY (3.11 Å)
主引用文献Staphylococcus aureus 70S after 30 minutes incubation a 37C
To Be Published
7ASP
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BU of 7asp by Molmil
Staphylococcus aureus 70S after 50 minutes incubation at 37C
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Cimicata, G, Bashan, A, Yonath, A.
登録日2020-10-27
公開日2021-11-17
最終更新日2025-07-09
実験手法ELECTRON MICROSCOPY (2.86 Å)
主引用文献Staphylococcus aureus 50S after 30 minutes incubation a 37C
To Be Published
7ATA
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BU of 7ata by Molmil
Nudaurelia capensis omega virus procapsid: virus-like particles expressed in Nicotiana benthamiana
分子名称: p70
著者Castells-Graells, R, Ribeiro, J.R.S, Domitrovic, T, Hesketh, E.L, Scarff, C.A, Johnson, J.E, Ranson, N.A, Lawson, D.M, Lomonossoff, G.P.
登録日2020-10-29
公開日2021-08-25
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (6.63 Å)
主引用文献Plant-expressed virus-like particles reveal the intricate maturation process of a eukaryotic virus.
Commun Biol, 4, 2021
7ATH
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BU of 7ath by Molmil
Crystal structure of UipA
分子名称: UipA, ZINC ION
著者Bremond, N, Gallois, N, Legrand, P, Chapon, V, Arnoux, P.
登録日2020-10-30
公開日2021-10-06
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.343 Å)
主引用文献Discovery and characterization of UipA, a uranium- and iron-binding PepSY protein involved in uranium tolerance by soil bacteria.
Isme J, 16, 2022
7ATK
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BU of 7atk by Molmil
Crystal structure of UipA in complex with Uranium
分子名称: URANIUM ATOM, UipA, ZINC ION
著者Bremond, N, Gallois, N, Legrand, P, Chapon, V, Arnoux, P.
登録日2020-10-30
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.855 Å)
主引用文献Discovery and characterization of UipA, a uranium- and iron-binding PepSY protein involved in uranium tolerance by soil bacteria.
Isme J, 16, 2022
7ATL
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BU of 7atl by Molmil
EstCE1, a hydrolase with promiscuous acyltransferase activity
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Esterase, ...
著者Palm, G.J, Lammers, M, Berndt, L.
登録日2020-10-30
公開日2020-11-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.478 Å)
主引用文献Discovery and Design of Family VIII Carboxylesterases as Highly Efficient Acyltransferases.
Angew.Chem.Int.Ed.Engl., 60, 2021
7AV4
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BU of 7av4 by Molmil
Dark state structure of the C432S mutant of Fatty Acid Photodecarboxylase (FAP)
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Fatty acid photodecarboxylase, chloroplastic, ...
著者Schlichting, I, Hartmann, E, Arnoux, P, Sorigue, D, Beisson, F.
登録日2020-11-04
公開日2021-04-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.936 Å)
主引用文献Mechanism and dynamics of fatty acid photodecarboxylase.
Science, 372, 2021

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件を2025-08-27に公開中

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