Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB形式変換不可の PDB エントリー
9C61
DownloadVisualize
BU of 9c61 by Molmil
Crystal structure of the human LRRK2 WDR domain in complex with CACHE1193-26
分子名称: (4R)-4-[4-(5-fluoro-1H-indol-3-yl)piperidine-1-carbonyl]piperidin-2-one, Non-specific serine/threonine protein kinase, UNKNOWN ATOM OR ION
著者Zeng, H, Dong, A, Kutera, M, Ilyassov, O, Seitova, A, Loppnau, P, Schapira, M, Arrowsmith, C.H, Edwards, A.M, Halabelian, L.
登録日2024-06-07
公開日2024-07-03
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of the human LRRK2 WDR domain in complex with CACHE1193-26
To be published
9C6P
DownloadVisualize
BU of 9c6p by Molmil
X-ray crystal structure of AmpC beta-lactamase with inhibitor
分子名称: 3-chloro-N-(5-chloro-2-methyl-1,3-benzothiazol-6-yl)-2-hydroxybenzene-1-sulfonamide, AmpC Beta-lactamase
著者Liu, F, Shoichet, B.K.
登録日2024-06-08
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.663 Å)
主引用文献Improved correlations with score, hit-rate, and affinity as docking library and testing scale increase
To Be Published
9C81
DownloadVisualize
BU of 9c81 by Molmil
X-ray crystal structure of AmpC beta-lactamase with inhibitor
分子名称: (2R)-2-phenoxy-3-{[(1S,2S,4S)-spiro[bicyclo[2.2.1]heptane-7,1'-cyclopropane]-2-carbonyl]amino}propanoic acid, AmpC Beta-lactamase
著者Liu, F, Shoichet, B.K, Bassim, V.
登録日2024-06-11
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Improved correlations with score, hit-rate, and affinity as docking library and testing scale increase
To Be Published
9C82
DownloadVisualize
BU of 9c82 by Molmil
Structure of human ULK1C:PI3KC3-C1 supercomplex
分子名称: Beclin 1-associated autophagy-related key regulator, Beclin-1, Phosphatidylinositol 3-kinase catalytic subunit type 3, ...
著者Chen, M, Hurley, J.H.
登録日2024-06-11
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (6.84 Å)
主引用文献Structure and activation of the human autophagy-initiating ULK1C:PI3KC3-C1 supercomplex
bioRxiv, 2023
9C83
DownloadVisualize
BU of 9c83 by Molmil
X-ray crystal structure of AmpC beta-lactamase with inhibitor
分子名称: AmpC Beta-lactamase, N-[(3M)-3-(5-chloro-1,2,3-thiadiazol-4-yl)phenyl]-5-methyl-3-oxo-2,3-dihydro-1,2-oxazole-4-sulfonamide
著者Liu, F, Shoichet, B.K.
登録日2024-06-11
公開日2024-06-19
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Improved correlations with score, hit-rate, and affinity as docking library and testing scale increase
To Be Published
9C84
DownloadVisualize
BU of 9c84 by Molmil
X-ray crystal structure of AmpC beta-lactamase with inhibitor
分子名称: 3,5-dichloro-N-(8-fluoroisoquinolin-5-yl)-2-hydroxybenzene-1-sulfonamide, AmpC Beta-lactamase
著者Liu, F, Shoichet, B.K.
登録日2024-06-12
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Improved correlations with score, hit-rate, and affinity as docking library and testing scale increase
To Be Published
9C8J
DownloadVisualize
BU of 9c8j by Molmil
X-ray crystal structure of AmpC beta-lactamase with inhibitor
分子名称: AmpC Beta-lactamase, N-(1-acetyl-2,3-dihydro-1H-indol-4-yl)-3-chloro-2-hydroxybenzene-1-sulfonamide
著者Liu, F, Shoichet, B.K.
登録日2024-06-12
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Improved correlations with score, hit-rate, and affinity as docking library and testing scale increase
To Be Published
9CGM
DownloadVisualize
BU of 9cgm by Molmil
The Structure of Spiroplasma Virus 4
分子名称: Capsid protein VP1, DNA binding protein ORF8
著者Mietzsch, M, McKenna, R.
登録日2024-06-30
公開日2024-07-17
最終更新日2024-08-07
実験手法ELECTRON MICROSCOPY (2.52 Å)
主引用文献The Structure of Spiroplasma Virus 4 : Exploring the Capsid Diversity of the Microviridae.
Viruses, 16, 2024
9CL9
DownloadVisualize
BU of 9cl9 by Molmil
WT 12C IM fraction, B-b3 with RluB bound
分子名称: 23S rRNA, Large ribosomal subunit protein bL20, Large ribosomal subunit protein bL21, ...
著者Lee, J, Sheng, K, Williamson, J.R.
登録日2024-07-10
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (5.04 Å)
主引用文献50S ribosome assembly intermediates at low temperature reveal bound RluB
To Be Published
9CMZ
DownloadVisualize
BU of 9cmz by Molmil
Crystal Structure of Cdk-related protein kinase 6 (PK6) from Plasmodium falciparum in complex with inhibitor KG2-051
分子名称: (4-{[5-chloro-4-(5-chlorothiophen-2-yl)pyrimidin-2-yl]amino}phenyl)[4-(pyrrolidin-1-yl)piperidin-1-yl]methanone, CHLORIDE ION, Protein kinase 6, ...
著者Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2024-07-15
公開日2024-07-24
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal Structure of Cdk-related protein kinase 6 (PK6) from Plasmodium falciparum in complex with inhibitor KG2-051
To be published
9CPG
DownloadVisualize
BU of 9cpg by Molmil
Structures of small molecules bound to RNA repeat expansions that cause Huntington's disease-like 2 and myotonic dystrophy type 1
分子名称: 4-carbamimidamidophenyl 4-carbamimidamidobenzoate, RNA (5'-R(*GP*AP*CP*AP*GP*CP*UP*GP*CP*UP*GP*UP*C)-3')
著者Chen, J.L, Taghavi, A, Disney, M.D, Fountain, M.A, Childs-Disney, J.L.
登録日2024-07-18
公開日2024-08-07
実験手法SOLUTION NMR
主引用文献Structures of small molecules bound to RNA repeat expansions that cause Huntington's disease-like 2 and myotonic dystrophy type 1.
Bioorg.Med.Chem.Lett., 2024
9CPI
DownloadVisualize
BU of 9cpi by Molmil
Structures of small molecules bound to RNA repeat expansions that cause Huntington's disease-like 2 and myotonic dystrophy type 1
分子名称: 4-[1-(2-aminoethyl)-4,5-dihydro-1H-imidazol-2-yl]-N-[4-(4,5-dihydro-1H-imidazol-2-yl)phenyl]benzamide, RNA (5'-R(*GP*AP*CP*AP*GP*CP*UP*GP*CP*UP*GP*UP*C)-3')
著者Chen, J.L, Taghavi, A, Disney, M.D, Fountain, M.A, Childs-Disney, J.L.
登録日2024-07-18
公開日2024-08-07
実験手法SOLUTION NMR
主引用文献Structures of small molecules bound to RNA repeat expansions that cause Huntington's disease-like 2 and myotonic dystrophy type 1.
Bioorg.Med.Chem.Lett., 2024
9CTH
DownloadVisualize
BU of 9cth by Molmil
Preliminary map of the Prothrombin-prothrombinase complex on nano discs
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Activated Factor V (FVa) heavy chain, Activated Factor V (FVa) light chain, ...
著者Stojanovski, B.M, Mohammed, B.M, Di Cera, E.
登録日2024-07-25
公開日2024-08-07
実験手法ELECTRON MICROSCOPY (6.47 Å)
主引用文献The Prothrombin-Prothrombinase Interaction.
Subcell Biochem, 104, 2024
9EMA
DownloadVisualize
BU of 9ema by Molmil
RUVBL1/2 in complex with ATP and CB-6644 inhibitor
分子名称: 5-chloranyl-2-ethoxy-4-fluoranyl-~{N}-[4-[[3-(methoxymethyl)-1-oxidanylidene-6,7-dihydro-5~{H}-pyrazolo[1,2-a][1,2]benzodiazepin-2-yl]amino]-2,2-dimethyl-4-oxidanylidene-butyl]benzamide, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Lopez-Perrote, A, Llorca, O, Garcia-Martin, C.
登録日2024-03-07
公開日2024-05-15
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Mechanism of allosteric inhibition of RUVBL1-RUVBL2 by the small-molecule CB-6644
Cell Rep Phys Sci, 2024
9EN6
DownloadVisualize
BU of 9en6 by Molmil
Crystal structure of RNA G2C4 repeats - native model pH 6.5
分子名称: MAGNESIUM ION, RNA (5'-R(*GP*GP*CP*CP*CP*C)-3')
著者Mateja-Pluta, M, Kiliszek, A.
登録日2024-03-12
公開日2024-05-01
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (0.918 Å)
主引用文献Antisense RNA C9orf72 hexanucleotide repeat associated with amyotrophic lateral sclerosis and frontotemporal dementia forms a triplex-like structure and binds small synthetic ligand.
Nucleic Acids Res., 52, 2024
9ENZ
DownloadVisualize
BU of 9enz by Molmil
X-ray structure of the adduct formed upon reaction of picoplatin with lysozyme (structure A)
分子名称: ACETATE ION, AMMONIA, Lysozyme C, ...
著者Ferraro, G, Merlino, A.
登録日2024-03-14
公開日2024-05-22
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Picoplatin binding to proteins: X-ray structures and mass spectrometry data on the adducts with lysozyme and ribonuclease A.
Dalton Trans, 53, 2024
9EO0
DownloadVisualize
BU of 9eo0 by Molmil
Small-Molecule Inhibitors of Programmed Cell Death-1/Programmed Death-Ligand 1
分子名称: Programmed cell death 1 ligand 1, SULFATE ION, ~{N}-[3-[3-[[5-[(2-hydroxyethylamino)methyl]pyridin-2-yl]carbonylamino]-2-methyl-phenyl]-2-methyl-phenyl]-5-[[3-(methylsulfonylamino)propylamino]methyl]pyridine-2-carboxamide
著者Plewka, J, Hec, A, Sitar, T, Holak, T.
登録日2024-03-14
公開日2024-06-19
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Nonsymmetrically Substituted 1,1'-Biphenyl-Based Small Molecule Inhibitors of the PD-1/PD-L1 Interaction.
Acs Med.Chem.Lett., 15, 2024
9EO2
DownloadVisualize
BU of 9eo2 by Molmil
X-ray structure of the adduct formed upon reaction of picoplatin with lysozyme (structure B)
分子名称: ACETATE ION, GLYCEROL, Lysozyme C, ...
著者Ferraro, G, Merlino, A.
登録日2024-03-14
公開日2024-05-22
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Picoplatin binding to proteins: X-ray structures and mass spectrometry data on the adducts with lysozyme and ribonuclease A.
Dalton Trans, 53, 2024
9EO5
DownloadVisualize
BU of 9eo5 by Molmil
X-ray structure of the adduct formed upon reaction of picoplatin with bovine pancreatic ribonuclease (structure C)
分子名称: AMMONIA, PLATINUM (II) ION, Ribonuclease pancreatic
著者Ferraro, G, Merlino, A.
登録日2024-03-14
公開日2024-05-22
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Picoplatin binding to proteins: X-ray structures and mass spectrometry data on the adducts with lysozyme and ribonuclease A.
Dalton Trans, 53, 2024
9EO8
DownloadVisualize
BU of 9eo8 by Molmil
X-ray structure of the adduct formed upon reaction of picoplatin with bovine pancreatic ribonuclease (structure D)
分子名称: AMMONIA, CHLORIDE ION, PLATINUM (II) ION, ...
著者Ferraro, G, Merlino, A.
登録日2024-03-14
公開日2024-05-22
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Picoplatin binding to proteins: X-ray structures and mass spectrometry data on the adducts with lysozyme and ribonuclease A.
Dalton Trans, 53, 2024
9EOJ
DownloadVisualize
BU of 9eoj by Molmil
Vertebrate microtubule-capping gamma-tubulin ring complex
分子名称: Gamma-tubulin complex component, Gamma-tubulin complex component 3 homolog, Gamma-tubulin complex component 6, ...
著者Vermeulen, B.J.A, Pfeffer, S.
登録日2024-03-15
公開日2024-04-17
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (17 Å)
主引用文献gamma-TuRC asymmetry induces local protofilament mismatch at the RanGTP-stimulated microtubule minus end.
Embo J., 43, 2024
9EOU
DownloadVisualize
BU of 9eou by Molmil
Crystal Structure of the b1b2 domains from Human Neuropilin-1 in complex with a peptide.
分子名称: Neuropilin-1, Osteopontin
著者Caing-Carlsson, R, Duelli, A, Walse, B.
登録日2024-03-15
公開日2024-06-26
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Identification of an osteopontin-derived peptide that binds neuropilin-1 and activates vascular repair responses and angiogenesis.
Pharmacol Res, 205, 2024
9EPV
DownloadVisualize
BU of 9epv by Molmil
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGC333
分子名称: 1,2-ETHANEDIOL, 5-[[2-[(3-chloranyl-4-phenyl-phenyl)methylamino]-7-azaspiro[3.5]nonan-7-yl]sulfonyl]-1,3-dimethyl-benzimidazol-2-one, Casein kinase II subunit alpha, ...
著者Kraemer, A, Greco, F, Knapp, S, Structural Genomics Consortium (SGC)
登録日2024-03-20
公開日2024-05-01
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Synthesis and evaluation of chemical linchpins for highly selective CK2 alpha targeting.
Eur.J.Med.Chem., 276, 2024
9EPW
DownloadVisualize
BU of 9epw by Molmil
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGC3336
分子名称: Casein kinase II subunit alpha, SULFATE ION, ~{N}-[(3-chloranyl-4-phenyl-phenyl)methyl]-2-[1-(3-methylquinolin-8-yl)sulfonylpiperidin-4-yl]ethanamine
著者Kraemer, A, Greco, F, Knapp, S, Structural Genomics Consortium (SGC)
登録日2024-03-20
公開日2024-05-01
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Synthesis and evaluation of chemical linchpins for highly selective CK2 alpha targeting.
Eur.J.Med.Chem., 276, 2024
9EPX
DownloadVisualize
BU of 9epx by Molmil
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGC3331
分子名称: 1,2-ETHANEDIOL, 7-[(2-chloranyl-1,3-benzothiazol-6-yl)sulfonyl]-~{N}-[(3-chloranyl-4-phenyl-phenyl)methyl]-7-azaspiro[3.5]nonan-2-amine, Casein kinase II subunit alpha, ...
著者Kraemer, A, Greco, F, Knapp, S, Structural Genomics Consortium (SGC)
登録日2024-03-20
公開日2024-05-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGC3331
To Be Published

223532

件を2024-08-07に公開中

PDB statisticsPDBj update infoContact PDBjnumon