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PDB形式変換不可の PDB エントリー
8WV6
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PaaZ, bifunctional enzyme
分子名称: Bifunctional protein PaaZ
著者Yadav, S, Vinothkumar, K.R.
登録日2023-10-23
公開日2024-07-17
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Factors affecting macromolecule orientations in thin films formed in cryo-EM.
Acta Crystallogr D Struct Biol, 80, 2024
8WWU
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BU of 8wwu by Molmil
1-naphthylamine GS in complex with AMP PNP
分子名称: Glutamine synthetase, MAGNESIUM ION, MANGANESE (II) ION, ...
著者Zhang, S.T, Zhou, N.Y.
登録日2023-10-26
公開日2024-01-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Discovery of the 1-naphthylamine biodegradation pathway reveals a glutamine synthetase-like protein that catalyzes 1-naphthylamine glutamylation
To Be Published
8WWV
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1-naphthylamine GS in complex with ADP and MetSox-P
分子名称: ADENOSINE-5'-DIPHOSPHATE, Glutamine synthetase, L-METHIONINE-S-SULFOXIMINE PHOSPHATE, ...
著者Zhang, S.T, Zhou, N.Y.
登録日2023-10-26
公開日2024-01-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Discovery of the 1-naphthylamine biodegradation pathway reveals a glutamine synthetase-like protein that catalyzes 1-naphthylamine glutamylation
To Be Published
8WYB
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BU of 8wyb by Molmil
Cryo-EM structure of DSR2 (H171A)-tube-NAD+ complex
分子名称: Bacillus phage SPR Tube protein, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SIR2-like domain-containing protein
著者Zhang, J.T, Jia, N, Liu, X.Y.
登録日2023-10-30
公開日2024-04-10
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (3.37 Å)
主引用文献Structural basis for phage-mediated activation and repression of bacterial DSR2 anti-phage defense system.
Nat Commun, 15, 2024
8X15
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BU of 8x15 by Molmil
Structure of nucleosome-bound SRCAP-C in the apo state
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Actin, ...
著者Yu, J, Wang, Q, Yu, Z, Li, W, Wang, L, Xu, Y.
登録日2023-11-06
公開日2024-03-06
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural insights into histone exchange by human SRCAP complex.
Cell Discov, 10, 2024
8X19
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BU of 8x19 by Molmil
Structure of nucleosome-bound SRCAP-C in the ADP-BeFx-bound state
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Actin, ...
著者Yu, J, Wang, Q, Yu, Z, Li, W, Wang, L, Xu, Y.
登録日2023-11-06
公開日2024-03-06
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural insights into histone exchange by human SRCAP complex.
Cell Discov, 10, 2024
8X1A
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BU of 8x1a by Molmil
Crystal structure of periplasmic G6P binding protein VcA0625
分子名称: 6-O-phosphono-alpha-D-glucopyranose, Iron(III) ABC transporter, periplasmic iron-compound-binding protein
著者Dasgupta, J, Saha, I.
登録日2023-11-06
公開日2024-04-17
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.604 Å)
主引用文献Structural insights in to the atypical type-I ABC Glucose-6-phosphate importer VCA0625-27 of Vibrio cholerae.
Biochem.Biophys.Res.Commun., 716, 2024
8X1C
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BU of 8x1c by Molmil
Structure of nucleosome-bound SRCAP-C in the ADP-bound state
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Actin, ...
著者Yu, J, Wang, Q, Yu, Z, Li, W, Wang, L, Xu, Y.
登録日2023-11-06
公開日2024-03-06
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural insights into histone exchange by human SRCAP complex.
Cell Discov, 10, 2024
8X6Z
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BU of 8x6z by Molmil
1-naphthylamine GS from Pseudomonas sp. JS3066
分子名称: Glutamine synthetase, MANGANESE (II) ION
著者Zhou, N.Y, Zhang, S.T.
登録日2023-11-22
公開日2024-01-03
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structure of 1-naphthylamine glutamine synthetase at 2.95 Angstroms resolution.
To Be Published
8X81
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BU of 8x81 by Molmil
Structure of leptin-LepR trimer with a large gap
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Leptin, ...
著者Xie, Y.F, Gao, G.F.
登録日2023-11-27
公開日2024-08-07
実験手法ELECTRON MICROSCOPY (3.77 Å)
主引用文献Structural plasticity of human leptin binding to its receptor LepR
Hlife, 1, 2023
8XAU
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BU of 8xau by Molmil
Cryo-EM structure of HerA
分子名称: ATP-binding protein
著者Wang, Y, Deng, Z.
登録日2023-12-05
公開日2024-06-05
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献Molecular and structural basis of an ATPase-nuclease dual-enzyme anti-phage defense complex.
Cell Res., 2024
8XAV
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BU of 8xav by Molmil
Cryo-EM structure of an anti-phage defense complex
分子名称: ATP-binding protein, DUF4297
著者Wang, Y, Deng, Z.
登録日2023-12-05
公開日2024-06-05
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.87 Å)
主引用文献Molecular and structural basis of an ATPase-nuclease dual-enzyme anti-phage defense complex.
Cell Res., 2024
8XAW
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BU of 8xaw by Molmil
Cryo-EM structure of an anti-phage defense complex bound to AMPPNP and DNA at state 1
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-binding protein, DUF4297, ...
著者An, Q, Deng, Z.
登録日2023-12-05
公開日2024-06-05
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.73 Å)
主引用文献Molecular and structural basis of an ATPase-nuclease dual-enzyme anti-phage defense complex.
Cell Res., 2024
8XAX
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BU of 8xax by Molmil
Cryo-EM structure of an anti-phage defense complex bound to AMPPNP and DNA at state 2
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-binding protein, DUF4297, ...
著者An, Q, Deng, Z.
登録日2023-12-05
公開日2024-06-05
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.92 Å)
主引用文献Molecular and structural basis of an ATPase-nuclease dual-enzyme anti-phage defense complex.
Cell Res., 2024
8XAY
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BU of 8xay by Molmil
Cryo-EM structure of an anti-phage defense complex bound to ATPrS and DNA
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-binding protein, DUF4297, ...
著者An, Q, Deng, Z.
登録日2023-12-05
公開日2024-06-05
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.81 Å)
主引用文献Molecular and structural basis of an ATPase-nuclease dual-enzyme anti-phage defense complex.
Cell Res., 2024
8XBU
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BU of 8xbu by Molmil
The cryo-EM structure of the decameric RAD51 ring bound to the nucleosome with the linker DNA binding
分子名称: DNA (153-MER), DNA (156-MER), DNA repair protein RAD51 homolog 1, ...
著者Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H.
登録日2023-12-07
公開日2024-03-27
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (4.24 Å)
主引用文献Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site.
Nature, 628, 2024
8XBV
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BU of 8xbv by Molmil
The cryo-EM structure of the RAD51 L1 and L2 loops bound to the linker DNA with the sticky end of the nucleosome
分子名称: DNA (5'-D(P*CP*GP*AP*AP*AP*AP*CP*GP*GP*CP*CP*AP*CP*CP*A)-3'), DNA (5'-D(P*TP*GP*GP*CP*CP*GP*TP*TP*TP*TP*CP*G)-3'), DNA repair protein RAD51 homolog 1
著者Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H.
登録日2023-12-07
公開日2024-03-27
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (7.61 Å)
主引用文献Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site.
Nature, 628, 2024
8XBX
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BU of 8xbx by Molmil
The cryo-EM structure of the RAD51 L2 loop bound to the linker DNA with the blunt end of the nucleosome
分子名称: DNA (5'-D(P*AP*AP*CP*GP*AP*AP*AP*AP*CP*GP*GP*CP*CP*AP*CP*CP*AP*CP*G)-3'), DNA (5'-D(P*CP*GP*TP*GP*GP*TP*GP*GP*CP*CP*GP*TP*TP*TP*TP*CP*GP*TP*T)-3'), DNA repair protein RAD51 homolog 1
著者Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H.
登録日2023-12-07
公開日2024-03-27
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (4.36 Å)
主引用文献Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site.
Nature, 628, 2024
8XBY
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BU of 8xby by Molmil
The cryo-EM structure of the RAD51 L1 and L2 loops bound to the linker DNA with the blunt end of the nucleosome
分子名称: DNA (5'-D(P*AP*AP*CP*GP*AP*AP*AP*AP*CP*GP*GP*CP*CP*AP*CP*CP*AP*CP*G)-3'), DNA (5'-D(P*CP*GP*TP*GP*GP*TP*GP*GP*CP*CP*GP*TP*TP*TP*TP*CP*GP*TP*T)-3'), DNA repair protein RAD51 homolog 1
著者Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H.
登録日2023-12-07
公開日2024-03-27
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (7.8 Å)
主引用文献Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site.
Nature, 628, 2024
8XE4
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BU of 8xe4 by Molmil
norbelladine 4'-O-methyltransferase complexed with Mg, SAH, and norbelladine
分子名称: GLYCEROL, MAGNESIUM ION, Norbelladine, ...
著者Saw, Y.Y.H, Nakashima, Y, Morita, H.
登録日2023-12-11
公開日2024-08-07
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structure-Based Catalytic Mechanism of Amaryllidaceae O-Methyltransferases
Acs Catalysis, 2024
8XEA
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BU of 8xea by Molmil
XBB.1.5 spike protein in complex with BD55-1205
分子名称: BD55-1205 heavy chain, BD55-1205 light chain, Spike glycoprotein
著者Feng, L.L.
登録日2023-12-11
公開日2024-04-24
実験手法ELECTRON MICROSCOPY (3.42 Å)
主引用文献XBB.1.5 spike protein in complex with BD55-1205
To Be Published
8XEG
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BU of 8xeg by Molmil
Cryo-EM structure of Adeno-associated Virus 9P31 in 1.76 angstrom.
分子名称: Capsid protein VP1
著者Zhang, R, Liu, Y, Lou, Z.
登録日2023-12-12
公開日2024-01-24
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (1.76 Å)
主引用文献Structural basis of the recognition of adeno-associated virus by the neurological system-related receptor carbonic anhydrase IV.
Plos Pathog., 20, 2024
8XFM
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BU of 8xfm by Molmil
The Crystal Structure of MNK2 from Biortus.
分子名称: 1,2-ETHANEDIOL, 5-(3-azanyl-1~{H}-indazol-6-yl)-1-[(3-chlorophenyl)methyl]pyridin-2-one, MAP kinase-interacting serine/threonine-protein kinase 2, ...
著者Wang, F, Cheng, W, Yuan, Z, Qi, J, Li, J.
登録日2023-12-14
公開日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The Crystal Structure of MNK2 from Biortus.
To Be Published
8XFQ
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BU of 8xfq by Molmil
Structure of the alginate epimerase/lyase complexed with penta-mannuronic acid
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, TRIETHYLENE GLYCOL, ...
著者Fujiwara, T.
登録日2023-12-14
公開日2024-05-15
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural basis for the minimal bifunctional alginate epimerase AlgE3 from Azotobacter chroococcum.
Febs Lett., 598, 2024
8XFR
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Structure of the alginate epimerase/lyase complexed with tetra-mannuronic acid
分子名称: ACETATE ION, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Fujiwara, T.
登録日2023-12-14
公開日2024-05-15
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for the minimal bifunctional alginate epimerase AlgE3 from Azotobacter chroococcum.
Febs Lett., 598, 2024

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件を2024-08-07に公開中

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