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PDB形式変換不可の PDB エントリー
8WA1
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The cryo-EM structure of the Nicotiana tabacum PEP-PAP-TEC2
分子名称: DNA (24-mer), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Wu, X.X, Zhang, Y.
登録日2023-09-06
公開日2024-03-13
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Cryo-EM structures of the plant plastid-encoded RNA polymerase.
Cell, 187, 2024
8WA2
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cryo-EM structure of native mastigonemes isolated from Chlamydomonas reinhardtii at 3.0 angstrom resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Huang, J, Tao, H, Chen, J, Pan, J, Yan, C, Yan, N.
登録日2023-09-06
公開日2024-04-10
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structure-guided discovery of protein and glycan components in native mastigonemes.
Cell, 187, 2024
8WAK
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BU of 8wak by Molmil
Structure of transcribing complex 2 (TC2), the initially transcribing complex with Pol II positioned 2nt downstream of TSS.
分子名称: Alpha-amanitin, CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, ...
著者Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y.
登録日2023-09-07
公開日2023-12-06
最終更新日2024-01-03
実験手法ELECTRON MICROSCOPY (5.47 Å)
主引用文献Structural visualization of transcription initiation in action.
Science, 382, 2023
8WAL
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BU of 8wal by Molmil
Structure of transcribing complex 3 (TC3), the initially transcribing complex with Pol II positioned 3nt downstream of TSS.
分子名称: Alpha-amanitin, CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, ...
著者Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y.
登録日2023-09-07
公開日2023-12-06
最終更新日2024-01-03
実験手法ELECTRON MICROSCOPY (8.52 Å)
主引用文献Structural visualization of transcription initiation in action.
Science, 382, 2023
8WAN
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BU of 8wan by Molmil
Structure of transcribing complex 4 (TC4), the initially transcribing complex with Pol II positioned 4nt downstream of TSS.
分子名称: Alpha-amanitin, CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, ...
著者Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y.
登録日2023-09-07
公開日2023-12-06
最終更新日2024-01-03
実験手法ELECTRON MICROSCOPY (6.07 Å)
主引用文献Structural visualization of transcription initiation in action.
Science, 382, 2023
8WAO
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BU of 8wao by Molmil
Structure of transcribing complex 5 (TC5), the initially transcribing complex with Pol II positioned 5nt downstream of TSS.
分子名称: Alpha-amanitin, CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, ...
著者Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y.
登録日2023-09-07
公開日2023-12-06
最終更新日2024-01-03
実験手法ELECTRON MICROSCOPY (6.4 Å)
主引用文献Structural visualization of transcription initiation in action.
Science, 382, 2023
8WAP
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BU of 8wap by Molmil
Structure of transcribing complex 6 (TC6), the initially transcribing complex with Pol II positioned 6nt downstream of TSS.
分子名称: Alpha-amanitin, CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, ...
著者Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y.
登録日2023-09-08
公開日2023-12-06
最終更新日2024-01-03
実験手法ELECTRON MICROSCOPY (5.85 Å)
主引用文献Structural visualization of transcription initiation in action.
Science, 382, 2023
8WAQ
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BU of 8waq by Molmil
Structure of transcribing complex 7 (TC7), the initially transcribing complex with Pol II positioned 7nt downstream of TSS.
分子名称: Alpha-amanitin, CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, ...
著者Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y.
登録日2023-09-08
公開日2023-12-06
最終更新日2024-01-03
実験手法ELECTRON MICROSCOPY (6.29 Å)
主引用文献Structural visualization of transcription initiation in action.
Science, 382, 2023
8WAR
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BU of 8war by Molmil
Structure of transcribing complex 8 (TC8), the initially transcribing complex with Pol II positioned 8nt downstream of TSS.
分子名称: Alpha-amanitin, CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, ...
著者Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y.
登録日2023-09-08
公開日2023-12-06
最終更新日2024-01-03
実験手法ELECTRON MICROSCOPY (7.2 Å)
主引用文献Structural visualization of transcription initiation in action.
Science, 382, 2023
8WAS
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BU of 8was by Molmil
Structure of transcribing complex 9 (TC9), the initially transcribing complex with Pol II positioned 9nt downstream of TSS.
分子名称: Alpha-amanitin, CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, ...
著者Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y.
登録日2023-09-08
公開日2023-12-06
最終更新日2024-01-03
実験手法ELECTRON MICROSCOPY (6.13 Å)
主引用文献Structural visualization of transcription initiation in action.
Science, 382, 2023
8WHX
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BU of 8whx by Molmil
Cryo- EM structure of Mycobacterium smegmatis 70S ribosome and RafH.
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Kumar, N, Sharma, S, Kaushal, P.S.
登録日2023-09-23
公開日2024-02-28
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Cryo- EM structure of the mycobacterial 70S ribosome in complex with ribosome hibernation promotion factor RafH.
Nat Commun, 15, 2024
8WI7
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BU of 8wi7 by Molmil
Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, bS1 and RafH.
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Kumar, N, Sharma, S, Kaushal, P.S.
登録日2023-09-24
公開日2024-02-28
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo- EM structure of the mycobacterial 70S ribosome in complex with ribosome hibernation promotion factor RafH.
Nat Commun, 15, 2024
8WI9
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BU of 8wi9 by Molmil
Cryo- EM structure of Mycobacterium smegmatis 30S ribosomal subunit (body 2) of 70S ribosome, bS1 and RafH.
分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Kumar, N, Sharma, S, Kaushal, P.S.
登録日2023-09-24
公開日2024-02-28
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo- EM structure of the mycobacterial 70S ribosome in complex with ribosome hibernation promotion factor RafH.
Nat Commun, 15, 2024
8WIB
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BU of 8wib by Molmil
Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, E- tRNA and RafH.
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Kumar, N, Sharma, S, Kaushal, P.S.
登録日2023-09-24
公開日2024-02-28
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo- EM structure of the mycobacterial 70S ribosome in complex with ribosome hibernation promotion factor RafH.
Nat Commun, 15, 2024
8WKP
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BU of 8wkp by Molmil
Structural basis of translation inhibition by a valine tRNA-derived fragment
分子名称: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
著者Wang, Y.H, Zhou, J.
登録日2023-09-28
公開日2024-04-10
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.62 Å)
主引用文献Structural basis of translation inhibition by a valine tRNA-derived fragment.
Life Sci Alliance, 7, 2024
8WLO
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BU of 8wlo by Molmil
Cryo-EM structure of SARS-CoV-2 prototype spike protein in complex with hippopotamus ACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme, ...
著者Han, P, Yang, R.R, Li, S.H.
登録日2023-09-30
公開日2024-03-27
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.62 Å)
主引用文献Molecular basis of hippopotamus ACE2 binding to SARS-CoV-2.
J.Virol., 98, 2024
8WO0
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BU of 8wo0 by Molmil
CryoEM structure of ZIKV rsNS1 filament
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Non-structural protein 1
著者Chew, B.L.A, Luo, D.
登録日2023-10-06
公開日2024-05-08
実験手法ELECTRON MICROSCOPY (8 Å)
主引用文献Structural basis of Zika virus NS1 multimerization and human antibody recognition
Npj Viruses, 2, 2024
8WQ2
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BU of 8wq2 by Molmil
Structural basis of translation inhibition by a valine tRNA-derived fragment
分子名称: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
著者Wang, Y.H, Zhou, J.
登録日2023-10-10
公開日2024-04-10
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural basis of translation inhibition by a valine tRNA-derived fragment.
Life Sci Alliance, 7, 2024
8WQ4
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BU of 8wq4 by Molmil
Structural basis of translation inhibition by a valine tRNA-derived fragment
分子名称: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
著者Wang, Y.H, Zhou, J.
登録日2023-10-11
公開日2024-04-10
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.53 Å)
主引用文献Structural basis of translation inhibition by a valine tRNA-derived fragment.
Life Sci Alliance, 7, 2024
8WQF
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BU of 8wqf by Molmil
cryo-EM structure of CUL2-RBX1-ELOB-ELOC-FEM1B bound with the C-degron of CUX1 (conformation 2)
分子名称: Cullin-2, E3 ubiquitin-protein ligase RBX1, N-terminally processed, ...
著者Chen, X, Zhang, K, Xu, C.
登録日2023-10-11
公開日2024-04-03
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.27 Å)
主引用文献Mechanism of Psi-Pro/C-degron recognition by the CRL2 FEM1B ubiquitin ligase.
Nat Commun, 15, 2024
8WQL
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BU of 8wql by Molmil
In situ PBS-PSII supercomplex from cyanobacterial Spirulina platensis
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者You, X, Zhang, X, Xiao, Y.N, Sun, S, Sui, S.F.
登録日2023-10-11
公開日2024-07-31
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure of in situ PBS-PSII supercomplex at 3.5 Angstroms resolution.
To Be Published
8WTJ
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BU of 8wtj by Molmil
XBB.1.5.70 spike protein in complex with ACE2
分子名称: Processed angiotensin-converting enzyme 2, Spike glycoprotein
著者Feng, L.L, Feng, L.L.
登録日2023-10-18
公開日2023-12-13
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.64 Å)
主引用文献Convergent evolution of SARS-CoV-2 XBB lineages on receptor-binding domain 455-456 synergistically enhances antibody evasion and ACE2 binding.
Plos Pathog., 19, 2023
8WU5
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BU of 8wu5 by Molmil
The complex of CAG repeat sequence-specific binding cPIP and dsDNA with A-A mismatch
分子名称: (1^2Z,4^2Z,11^2Z,14^2Z,22^2Z,25^2Z,32^2Z,35^2Z,19R,40R)-1^1,4^1,11^1,14^1,22^1,25^1,32^1,35^1-octamethyl-2,5,9,12,15,20,23,26,30,33,36,41-dodecaoxo-1^1H,4^1H,11^1H,14^1H,22^1H,25^1H,32^1H,35^1H-3,6,10,13,16,21,24,27,31,34,37,42-dodecaaza-1(2,4),11,22,32(4,2)-tetraimidazola-4,14,25,35(4,2)-tetrapyrrolacyclodotetracontaphane-19,40-diaminium, DNA (5'-D(*GP*CP*(CBR)P*GP*AP*GP*CP*AP*GP*CP*AP*CP*GP*GP*C)-3')
著者Abe, K, Takeda, K, Sugiyama, H.
登録日2023-10-20
公開日2024-06-05
最終更新日2024-06-12
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Studies of a Complex of a CAG/CTG Repeat Sequence-Specific Binding Molecule and A-A-Mismatch-Containing DNA.
Jacs Au, 4, 2024
8WUT
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BU of 8wut by Molmil
SpCas9-MMLV RT-pegRNA-target DNA complex (initiation)
分子名称: CRISPR-associated endonuclease Cas9/Csn1, DNA (5'-D(*TP*GP*AP*TP*GP*GP*CP*AP*GP*AP*GP*TP*AP*CP*TP*AP*G)-3'), DNA (51-MER), ...
著者Shuto, Y, Nakagawa, R, Hoki, M, Omura, S.N, Hirano, H, Itoh, Y, Nureki, O.
登録日2023-10-21
公開日2024-06-05
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis for pegRNA-guided reverse transcription by a prime editor.
Nature, 631, 2024
8WUU
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BU of 8wuu by Molmil
SpCas9-pegRNA-target DNA complex (pre-initiation)
分子名称: CRISPR-associated endonuclease Cas9/Csn1, DNA (34-MER), DNA (5'-D(*TP*GP*AP*TP*GP*GP*CP*AP*GP*AP*GP*TP*AP*CP*TP*AP*G)-3'), ...
著者Shuto, Y, Nakagawa, R, Hoki, M, Omura, S.N, Hirano, H, Itoh, Y, Nureki, O.
登録日2023-10-21
公開日2024-06-05
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural basis for pegRNA-guided reverse transcription by a prime editor.
Nature, 631, 2024

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件を2024-08-07に公開中

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